Evidence map›Paper›PMID 32265554›Full record

ArticleNature biotechnology2020

Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing.

Christian Lieven, Moritz E Beber, Brett G Olivier, Frank T Bergmann, Meric Ataman, Parizad Babaei, Jennifer A Bartell, Lars M Blank, Siddharth Chauhan, Kevin Correia and 59 more

Abstract readPublished Erratum
In one paragraph

Article in Nature biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Reconstruction and Analysis of a Genome-Scale Metabolic Model ofInternational journal of molecular sciences · 2024
    Article
  3. Review
  4. Review
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

69 authors.

Christian Lieven *Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.ORCID http://orcid.org/0000-0001-5377-4091
Moritz E Beber *Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.ORCID http://orcid.org/0000-0003-2406-1978
Brett G OlivierSystems Biology Lab, Amsterdam Institute of Molecular and Life Sciences (AIMMS), Vrije Universiteit Amsterdam, Amsterdam, the Netherlands.ORCID http://orcid.org/0000-0002-5293-5321
Frank T BergmannBioQUANT/COS, Heidelberg University, Heidelberg, Germany.
Meric AtamanEcole Polytechnique Fédérale de Lausanne, Laboratory of Computational Systems Biotechnology, Lausanne, Switzerland.
Parizad BabaeiNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
Jennifer A BartellNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.ORCID http://orcid.org/0000-0003-2750-9678
Lars M BlankiAMB-Institute of Applied Microbiology, ABBt-Aachen Biology and Biotechnology, RWTH Aachen University, Aachen, Germany.
Siddharth ChauhanDepartment of Bioengineering, University of California, La Jolla, CA, USA.ORCID http://orcid.org/0000-0001-6674-895X
Kevin CorreiaDepartment of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, Ontario, Canada.ORCID http://orcid.org/0000-0001-7130-1765
Christian DienerHuman Systems Biology Laboratory, Instituto Nacional de Medicina Genomica & Coordinación de la Investigación Científica-Red de Apoyo a la Investigación, UNAM, Mexico City, Mexico.
Andreas DrägerComputational Systems Biology of Infection and Antimicrobial-Resistant Pathogens, Institute for Biomedical Informatics (IBMI), Tübingen, Germany.ORCID http://orcid.org/0000-0002-1240-5553
Birgitta E EbertiAMB-Institute of Applied Microbiology, ABBt-Aachen Biology and Biotechnology, RWTH Aachen University, Aachen, Germany.
Janaka N EdirisingheArgonne National Laboratory, Lemont, IL, USA.
José P FariaArgonne National Laboratory, Lemont, IL, USA.
Adam M FeistNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.ORCID http://orcid.org/0000-0002-8630-4800
Georgios FengosEcole Polytechnique Fédérale de Lausanne, Laboratory of Computational Systems Biotechnology, Lausanne, Switzerland.
Ronan M T FlemingAnalytical Biosciences, Division of Systems Biomedicine and Pharmacology, Leiden Academic Centre for Drug Research, Leiden University, Leiden, the Netherlands.ORCID http://orcid.org/0000-0001-5346-9812
Beatriz García-JiménezDepartment of Systems Biology, Centro Nacional de Biotecnología, Consejo Superior de Investigaciones Científicas (CNB-CSIC), Madrid, Spain.
Vassily HatzimanikatisEcole Polytechnique Fédérale de Lausanne, Laboratory of Computational Systems Biotechnology, Lausanne, Switzerland.ORCID http://orcid.org/0000-0001-6432-4694
Wout van HelvoirtDepartment of Animal and Aquacultural Sciences, Faculty of Biosciences, Norwegian University of Life Sciences, Oslo, Norway.ORCID http://orcid.org/0000-0002-9143-9726
Christopher S HenryArgonne National Laboratory, Lemont, IL, USA.
Henning HermjakobEuropean Bioinformatics Institute, European Molecular Biology Laboratory (EMBL-EBI), Wellcome Trust Genome Campus, Cambridge, UK.ORCID http://orcid.org/0000-0001-8479-0262
Markus J HerrgårdNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.ORCID http://orcid.org/0000-0003-2377-9929
Ali KaafaraniNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.ORCID http://orcid.org/0000-0002-2805-310X
Hyun Uk KimDepartment of Chemical and Biomolecular Engineering (BK21 Plus Program), BioProcess Engineering Research Center, BioInformatics Research Center, Institute for the BioCentury, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Korea.ORCID http://orcid.org/0000-0001-7224-642X
Zachary KingDepartment of Bioengineering, University of California, La Jolla, CA, USA.ORCID http://orcid.org/0000-0003-1238-1499
Steffen KlamtAnalysis and Redesign of Biological Networks, Max Planck Institute for Dynamics of Complex Technical Systems Magdeburg, Magdeburg, Germany.ORCID http://orcid.org/0000-0003-2563-7561
Edda KlippTheoretical Biophysics, Humboldt-Universität zu Berlin, Berlin, Germany.ORCID http://orcid.org/0000-0002-0567-7075
Jasper J KoehorstDepartment of Agrotechnology and Food Sciences, Laboratory of Systems and Synthetic Biology, Wageningen University & Research, Wageningen, the Netherlands.ORCID http://orcid.org/0000-0001-8172-8981
Matthias KönigTheoretical Biophysics, Humboldt-Universität zu Berlin, Berlin, Germany.ORCID http://orcid.org/0000-0003-1725-179X
Meiyappan LakshmananBioprocessing Technology Institute, Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.ORCID http://orcid.org/0000-0003-2356-3458
Dong-Yup LeeBioprocessing Technology Institute, Agency for Science, Technology and Research (A*STAR), Singapore, Singapore.
Sang Yup LeeNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.ORCID http://orcid.org/0000-0003-0599-3091
Sunjae LeeScience for Life Laboratory, KTH -Royal Institute of Technology, Stockholm, Sweden.ORCID http://orcid.org/0000-0002-6428-5936
Nathan E LewisDepartment of Bioengineering, University of California, La Jolla, CA, USA.
Filipe LiuArgonne National Laboratory, Lemont, IL, USA.
Hongwu MaKey Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, P.R. China.
Daniel MachadoStructural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.
Radhakrishnan MahadevanDepartment of Chemical Engineering and Applied Chemistry, University of Toronto, Toronto, Ontario, Canada.ORCID http://orcid.org/0000-0002-1270-9063
Paulo MaiaSilicoLife Lda., Braga, Portugal.ORCID http://orcid.org/0000-0002-0848-8683
Adil MardinogluScience for Life Laboratory, KTH -Royal Institute of Technology, Stockholm, Sweden.ORCID http://orcid.org/0000-0002-4254-6090
Gregory L MedlockDepartment of Biomedical Engineering, University of Virginia, Charlottesville, Virginia, USA.
Jonathan M MonkDepartment of Bioengineering, University of California, La Jolla, CA, USA.
Jens NielsenNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.ORCID http://orcid.org/0000-0002-9955-6003
Lars Keld NielsenNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.ORCID http://orcid.org/0000-0001-8191-3511
Juan NogalesDepartment of Systems Biology, Centro Nacional de Biotecnología, Consejo Superior de Investigaciones Científicas (CNB-CSIC), Madrid, Spain.ORCID http://orcid.org/0000-0002-4961-0833
Intawat NookaewChalmers University of Technology, Department of Biology and Biological Engineering, Division of Systems and Synthetic Biology, Göteborg, Sweden.
Bernhard O PalssonNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.ORCID http://orcid.org/0000-0003-2357-6785
Jason A PapinDepartment of Biomedical Engineering, University of Virginia, Charlottesville, Virginia, USA.
Kiran R PatilStructural and Computational Biology Unit, European Molecular Biology Laboratory (EMBL), Heidelberg, Germany.ORCID http://orcid.org/0000-0002-6166-8640
Mark PoolmanOxford Brookes University, Oxford, UK.ORCID http://orcid.org/0000-0002-3972-5418
Nathan D PriceInstitute for Systems Biology, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-4157-0267
Osbaldo Resendis-AntonioHuman Systems Biology Laboratory, Instituto Nacional de Medicina Genomica & Coordinación de la Investigación Científica-Red de Apoyo a la Investigación, UNAM, Mexico City, Mexico.
Anne RichelleDepartment of Pediatrics and Novo Nordisk Foundation Center for Biosustainability, University of California, San Diego School of Medicine, La Jolla, CA, USA.
Isabel RochaCentre of Biological Engineering, University of Minho, Braga, Portugal.
Benjamín J SánchezNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark.
Peter J SchaapDepartment of Agrotechnology and Food Sciences, Laboratory of Systems and Synthetic Biology, Wageningen University & Research, Wageningen, the Netherlands.ORCID http://orcid.org/0000-0002-4346-6084
Rahuman S Malik SheriffEuropean Bioinformatics Institute, European Molecular Biology Laboratory (EMBL-EBI), Wellcome Trust Genome Campus, Cambridge, UK.
Saeed ShoaieScience for Life Laboratory, KTH -Royal Institute of Technology, Stockholm, Sweden.ORCID http://orcid.org/0000-0001-5834-4533
Nikolaus SonnenscheinNovo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Lyngby, Denmark. niso@biosustain.dtu.dk.ORCID http://orcid.org/0000-0002-7581-4936
Bas TeusinkSystems Biology Lab, Amsterdam Institute of Molecular and Life Sciences (AIMMS), Vrije Universiteit Amsterdam, Amsterdam, the Netherlands.ORCID http://orcid.org/0000-0003-3929-0423
Paulo VilaçaSilicoLife Lda., Braga, Portugal.
Jon Olav VikDepartment of Animal and Aquacultural Sciences, Faculty of Biosciences, Norwegian University of Life Sciences, Oslo, Norway.ORCID http://orcid.org/0000-0002-7778-4515
Judith A H WodkeTheoretical Biophysics, Humboldt-Universität zu Berlin, Berlin, Germany.
Joana C XavierInstitute for Molecular Evolution, Heinrich-Heine-University Düsseldorf, Düsseldorf, Germany.ORCID http://orcid.org/0000-0001-9242-8968
Qianqian YuanKey Laboratory of Systems Microbial Biotechnology, Tianjin Institute of Industrial Biotechnology, Chinese Academy of Sciences, Tianjin, P.R. China.
Maksim ZakhartsevDepartment of Animal and Aquacultural Sciences, Faculty of Biosciences, Norwegian University of Life Sciences, Oslo, Norway.
Cheng ZhangScience for Life Laboratory, KTH -Royal Institute of Technology, Stockholm, Sweden.ORCID http://orcid.org/0000-0002-3721-8586

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
NCATS NIH HHS UL1 TR001863
6 · The paper itself

Abstract

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

Identifiers

PMID32265554
PMCPMC7138757

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.