Evidence map›Paper›PMID 32264966›Full record

ArticleAntimicrobial resistance and infection control2020

Candida tropicalis is the most prevalent yeast species causing candidemia in Algeria: the urgent need for antifungal stewardship and infection control measures.

Youcef Megri, Amir Arastehfar, Teun Boekhout, Farnaz Daneshnia, Caroline Hörtnagl, Bettina Sartori, Ahmed Hafez, Weihua Pan, Cornelia Lass-Flörl, Boussad Hamrioui

Open access · goldAbstract readMulticenter Study
In one paragraph

Article in Antimicrobial resistance and infection control, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 1 pooled it
1.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 1 synthesis or guideline pooled it, 63 citations in OpenAlex.

  1. Pooled it
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  4. Non-Life (Basel, Switzerland) · 2026
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  5. A Cross-Sectional Study to DetermineBioMed research international · 2026
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  12. Biochemical and Physiological Profiles ofLife (Basel, Switzerland) · 2025
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  18. Invasive candidiasis.Nature reviews. Disease primers · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Youcef MegriParasitology and Mycology Department, Mustapha University Hospital, 16000, Algiers, Algeria.
Amir ArastehfarYeast Department, Westerdijk Fungal Biodiversity Institute, Utrecht, The Netherlands. a.arastehfar.nl@gmail.com.
Teun BoekhoutYeast Department, Westerdijk Fungal Biodiversity Institute, Utrecht, The Netherlands.
Farnaz DaneshniaYeast Department, Westerdijk Fungal Biodiversity Institute, Utrecht, The Netherlands.
Caroline HörtnaglInstitute of Hygiene and Medical Microbiology, Medical University of Innsbruck, Innsbruck, Austria.
Bettina SartoriInstitute of Hygiene and Medical Microbiology, Medical University of Innsbruck, Innsbruck, Austria.
Ahmed HafezBiotechvana, 46980, Paterna, Valencia, Spain.
Weihua PanShanghai Key Laboratory Molecular Medical Mycology, Shanghai, 200003, China. panweihua@smmu.edu.cn.
Cornelia Lass-FlörlInstitute of Hygiene and Medical Microbiology, Medical University of Innsbruck, Innsbruck, Austria.
Boussad HamriouiParasitology and Mycology Department, Mustapha University Hospital, 16000, Algiers, Algeria.
Universität Innsbruck · ATWesterdijk Fungal Biodiversity Institute · NLHôpital Mustapha Pacha · DZParc Científic de la Universitat de València · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDespite being associated with a high mortality and economic burden, data regarding candidemia are scant in Algeria. The aim of this study was to unveil the epidemiology of candidemia in Algeria, evaluate the antifungal susceptibility pattern of causative agents and understand the molecular mechanisms of antifungal resistance where applicable. Furthermore, by performing environmental screening and microsatellite typing we sought to identify the source of infection.

methodsWe performed a retrospective epidemiological-based surveillance study and collected available blood yeast isolates recovered from the seven hospitals in Algiers. To identify the source of infection, we performed environmental screening from the hands of healthcare workers (HCWs) and high touch areas. Species identification was performed by API Auxa-Color and MALDI-TOF MS and ITS sequencing was performed for species not reliably identified by MALDI-TOF MS. Antifungal susceptibility testing followed CLSI M27-A3/S4 and included all blood and environmental yeast isolates. ERG11 sequencing was performed for azole-resistant Candida isolates. Microsatellite typing was performed for blood and environmental Candida species, where applicable.

resultsCandida tropicalis (19/66) was the main cause of candidemia in these seven hospitals, followed by Candida parapsilosis (18/66), Candida albicans (18/66), and Candida glabrata (7/66). The overall mortality rate was 68.6% (35/51) and was 81.2% for C. tropicalis-infected patients (13/16). Fluconazole was the main antifungal drug used (12/51); 41% of the patients (21/51) did not receive any systemic treatment. Candida parapsilosis was isolated mainly from the hands of HCWs (7/28), and various yeasts were collected from high-touch areas (11/47), including Naganishia albida, C. parapsilosis and C. glabrata. Typing data revealed interhospital transmission on two occasions for C. parapsilosis and C. glabrata, and the same clone of C. parapsilosis infected two patients within the same hospital. Resistance was only noted for C. tropicalis against azoles (6/19) and fluconazole-resistant C. tropicalis isolates (≥8 μg/ml) (6/19) contained a novel P56S (5/6) amino acid substitution and a previously reported one (V234F; 1/6) in Erg11p.

conclusionsCollectively, our data suggest an urgent need for antifungal stewardship and infection control strategies to improve the clinical outcome of Algerian patients with candidemia. The high prevalence of C. tropicalis joined by fluconazole-resistance may hamper the therapeutic efficacy of fluconazole, the frontline antifungal drug used in Algeria.

Indexed as

Drug Resistance, FungalAlgeriaAntifungal AgentsAntimicrobial StewardshipCandidaCandida tropicalisCandidemiaHandHealth PersonnelHumansInfection ControlMicrobial Sensitivity TestsMicrosatellite RepeatsMycological Typing TechniquesPhylogenyPopulation SurveillanceAntifungal AgentsAlgeriaAntifungal susceptibility testingCandidemiaEnvironmental screeningERG11 sequencingMALDI-TOF MSMicrosatellite typing

Identifiers

PMID32264966
PMCPMC7140370
OpenAlexW3014867618

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.