Evidence map›Paper›PMID 32264874›Full record

ArticleRespiratory research2020

Changes of DNA methylation are associated with changes in lung function during adolescence.

Shadia Khan Sunny, Hongmei Zhang, Faisal I Rezwan, Caroline L Relton, A John Henderson, Simon Kebede Merid, Erik Melén, Jenny Hallberg, S Hasan Arshad, Susan Ewart and 1 more

Open access · goldAbstract read
In one paragraph

Article in Respiratory research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.0field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Trial
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  9. Genetic Control of Human Infection with SARS-CoV-2.Russian journal of genetics · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 7 institutions in 3 countries.

Shadia Khan SunnyDivision of Epidemiology, Biostatistics, and Environmental Health, School of Public Health, University of Memphis, Memphis, TN, 38152, USA.
Hongmei ZhangDivision of Epidemiology, Biostatistics, and Environmental Health, School of Public Health, University of Memphis, Memphis, TN, 38152, USA. hzhang6@memphis.edu.
Faisal I RezwanSchool of Water, Energy and Environment, Cranfield University, Cranfield, Bedfordshire, MK43 0AL, England.
Caroline L ReltonMRC Integrative Epidemiology Unit, University of Bristol, Bristol, BS8 2BN, UK.
A John HendersonPopulation Health Sciences, University of Bristol, Bristol, BS8 2BN, UK.
Simon Kebede MeridDepartment of Clinical Sciences and Education Södersjukhuset, Karolinska Institutet, Stockholm, Sweden.
Erik MelénDepartment of Clinical Sciences and Education Södersjukhuset, Karolinska Institutet, Stockholm, Sweden.
Jenny HallbergDepartment of Clinical Sciences and Education Södersjukhuset, Karolinska Institutet, Stockholm, Sweden.
S Hasan ArshadClinical and Experimental Sciences, Faculty of Medicine, University of Southampton, Southampton, SO16 6YD, UK.
Susan EwartLarge Animal Clinical Sciences, Michigan State University, East Lansing, MI, USA.
John W HollowayHuman Development and Health, Faculty of Medicine, University of Southampton, Southampton, SO16 6YD, UK.
Karolinska Institutet · SEUniversity of Bristol · GBUniversity of Memphis · USUniversity of Southampton · GBCranfield University · GBMichigan State University · USStockholm South General Hospital · SE

Funding

Does epigenetic methylation explain the gender-switch in adolescent asthma?R01AI121226 · NIAID · UNIVERSITY OF MEMPHIS · PI HOLLOWAY, JOHN W, ZHANG, HONGMEI · 2016 to 2020
$3.2M
Medical Research Council G0900747Medical Research Council MC_PC_15018Medical Research Council MC_PC_19009Medical Research Council MC_UU_00011/5Medical Research Council MC_UU_12013/1Medical Research Council MC_UU_12013/2Medical Research Council MC_UU_12013/8Medical Research Council MR/M022501/1NIAID NIH HHS R01 AI121226Wellcome Trust
6 · The paper itself

Abstract

backgroundAdolescence is a significant period for the gender-dependent development of lung function. Prior studies have shown that DNA methylation (DNA-M) is associated with lung function and DNA-M at some cytosine-phosphate-guanine dinucleotide sites (CpGs) changes over time. This study examined whether changes of DNA-M at lung-function-related CpGs are associated with changes in lung function during adolescence for each gender, and if so, the biological significance of the detected CpGs.

methodsGenome-scale DNA-M was measured in peripheral blood samples at ages 10 (n = 330) and 18 years (n = 476) from the Isle of Wight (IOW) birth cohort in United Kingdom, using Illumina Infinium arrays (450 K and EPIC). Spirometry was conducted at both ages. A training and testing method was used to screen 402,714 CpGs for their potential associations with lung function. Linear regressions were applied to assess the association of changes in lung function with changes of DNA-M at those CpGs potentially related to lung function. Adolescence-related and personal and family-related confounders were included in the model. The analyses were stratified by gender. Multiple testing was adjusted by controlling false discovery rate of 0.05. Findings were further examined in two independent birth cohorts, the Avon Longitudinal Study of Children and Parents (ALSPAC) and the Children, Allergy, Milieu, Stockholm, Epidemiology (BAMSE) cohort. Pathway analyses were performed on genes to which the identified CpGs were mapped.

resultsFor females, 42 CpGs showed statistically significant associations with change in FEV

conclusionsThe detected 11 CpGs in all three cohorts have the potential to serve as the candidate epigenetic markers for changes in lung function during adolescence in females.

Indexed as

AdolescentChildCohort StudiesCpG IslandsDNA MethylationEpigenesis, GeneticFemaleHumansLongitudinal StudiesLungMaleSpirometryUnited KingdomAdolescenceALSPACBAMSEDNA methylationGenome-wideIOW cohortLung function

Identifiers

PMID32264874
PMCPMC7140357
OpenAlexW3014476507

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.