Evidence map›Paper›PMID 32255771›Full record

ArticleMedical science monitor : international medical journal of experimental and clinical research2020

Sex Differences in Osteoarthritis Pathogenesis: A Comprehensive Study Based on Bioinformatics.

Yunfeng Yang, Xiaomeng You, Jordan Daniel Cohen, Haichao Zhou, Wenbao He, Zihua Li, Yuan Xiong, Tao Yu

Open access · hybridAbstract read
In one paragraph

Article in Medical science monitor : international medical journal of experimental and clinical research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Yunfeng YangDepartment of Orthopedic Surgery, Tongji Hospital, Tongji University School of Medicine, Shanghai, China (mainland).
Xiaomeng YouDepartment of Orthopedic Surgery, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Jordan Daniel CohenDepartment of Orthopedic Surgery, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Haichao ZhouDepartment of Orthopedic Surgery, Tongji Hospital, Tongji University School of Medicine, Shanghai, China (mainland).
Wenbao HeDepartment of Orthopedic Surgery, Tongji Hospital, Tongji University School of Medicine, Shanghai, China (mainland).
Zihua LiDepartment of Orthopedic Surgery, Tongji Hospital, Tongji University School of Medicine, Shanghai, China (mainland).
Yuan XiongDepartment of Orthopedics, Union Hospital, Tongji Medical College, Huazhong University of Science and Technology, Wuhan, Hubei, China (mainland).
Tao YuDepartment of Orthopedic Surgery, Tongji Hospital, Tongji University School of Medicine, Shanghai, China (mainland).
Tongji Hospital · CNBrigham and Women's Hospital · USHarvard University · USHuazhong University of Science and Technology · CNTongji University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND Osteoarthritis (OA) is a common disorder in the elderly. OA influences the daily life of patients and has become a worldwide health problem. It is still unclear whether the pathogenesis mechanism is different between males and females. This study investigated the differentially expressed genes (DEGs) and explored the different signaling pathways of OA between males and females. MATERIAL AND METHODS Data sets of GSE55457, GSE55584, and GSE12021 were retrieved from Gene Expression Omnibus to conduct DEGs analysis. Enrichment analysis of Kyoto Encyclopedia of Genes and Genomes pathway and Gene Ontology term was performed using the Database for Annotation, Visualization and Integrated Discovery (DAVID) bioinformatics tool. The protein interaction network was constructed in Cytoscape 3.7.2. qRT-PCR was then performed to validate the expression of hub genes in OA patients and healthy people. RESULTS In total, 4 co-upregulated and 10 co-downregulated genes were identified. We found that enriched pathways were different between males and females. BCL2L1, EEF1A1, EEF2, HNRNPD, and PABPN1 were considered as hub genes in OA pathogenesis in males, while EEF2, EEF1A1, RPL37A, FN1 were considered as hub genes in OA pathogenesis in females. Consistent with the bioinformatics analysis, the qRT-PCR analysis also showed that the gene expression of BCL2L1, HNRNPD, and PABPN1 was significantly lower in male OA patients. In contrast, EEF2, EEF1A1, and RPL37A were significantly lower in female OA patients. CONCLUSIONS The DEGs identified may be involved in different OA disease progression mechanisms between males and females, and they are considered as treatment targets or prognosis markers for males and females. The pathogenesis mechanism is sex-dependent.

Indexed as

AgedAged, 80 and overbcl-X ProteinComputational BiologyDatabases, GeneticEukaryotic Initiation Factor-2FemaleGene Expression ProfilingGene OntologyGene Regulatory NetworksHeterogeneous Nuclear Ribonucleoprotein D0HumansMaleMiddle AgedOsteoarthritisPeptide Elongation Factor 1BCL2L1 protein, humanbcl-X ProteinEEF1A1 protein, humanEukaryotic Initiation Factor-2Heterogeneous Nuclear Ribonucleoprotein D0HNRNPD protein, humanPABPN1 protein, humanPeptide Elongation Factor 1Poly(A)-Binding Protein I

Identifiers

PMID32255771
PMCPMC7163332
OpenAlexW3014776943

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.