Evidence map›Paper›PMID 32253345›Full record

ArticleMolecular and cellular biology2020

Assembly of SNAPc, Bdp1, and TBP on the U6 snRNA Gene Promoter in Drosophila melanogaster.

Mun Kyoung Kim, An Tranvo, Ann Marie Hurlburt, Neha Verma, Phuc Phan, Jie Luo, Jeff Ranish, William E Stumph

Open access · greenAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Molecular and cellular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Reply to Schramm, L. Comment on "Li et al.Diagnostics (Basel, Switzerland) · 2022
    Article
  2. Diagnostics (Basel, Switzerland) · 2021
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Mun Kyoung KimDepartment of Chemistry and Biochemistry and Molecular Biology Institute, San Diego State University, San Diego, California, USA.
An TranvoDepartment of Chemistry and Biochemistry and Molecular Biology Institute, San Diego State University, San Diego, California, USA.
Ann Marie HurlburtDepartment of Biology and Molecular Biology Institute, San Diego State University, San Diego, California, USA.
Neha VermaDepartment of Biology and Molecular Biology Institute, San Diego State University, San Diego, California, USA.
Phuc PhanDepartment of Chemistry and Biochemistry and Molecular Biology Institute, San Diego State University, San Diego, California, USA.
Jie LuoInstitute for Systems Biology, Seattle, Washington, USA.
Jeff RanishInstitute for Systems Biology, Seattle, Washington, USA.
William E StumphDepartment of Chemistry and Biochemistry and Molecular Biology Institute, San Diego State University, San Diego, California, USA wstumph@sdsu.edu.
San Diego State University · USInstitute for Systems Biology · US

Funding

National Science Foundation MCB-1616487
6 · The paper itself

Abstract

U6 snRNA is transcribed by RNA polymerase III (Pol III) and has an external upstream promoter that consists of a TATA sequence recognized by the TBP subunit of the Pol III basal transcription factor IIIB and a proximal sequence element (PSE) recognized by the small nuclear RNA activating protein complex (SNAPc). Previously, we found that

Indexed as

AnimalsDNA-Binding ProteinsDrosophila melanogasterDrosophila ProteinsPromoter Regions, GeneticProtein BindingProtein Interaction MapsProtein SubunitsRNA, Small NuclearTATA-Box Binding ProteinTranscription Factor TFIIIBBdp1 protein, DrosophilaDNA-Binding ProteinsDrosophila ProteinsPbp45 protein, DrosophilaProtein SubunitsRNA, Small NuclearTATA-Box Binding ProteinTBP protein, DrosophilaTranscription Factor TFIIIBU6 small nuclear RNASNAPc-Bdp1 interactionTBP recruitmenttranscription factor assemblyU6 preinitiation complexU6 small nuclear RNA transcription

Identifiers

PMID32253345
PMCPMC7261721
OpenAlexW3014882303

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.