Evidence map›Paper›PMID 32253314›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Aminoacyl-tRNA synthetase inhibition activates a pathway that branches from the canonical amino acid response in mammalian cells.

Yeonjin Kim, Mark S Sundrud, Changqian Zhou, Maja Edenius, Davide Zocco, Kristen Powers, Miao Zhang, Ralph Mazitschek, Anjana Rao, Chang-Yeol Yeo and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Another Notch in the Belt of Rheumatoid Arthritis.Arthritis & rheumatology (Hoboken, N.J.) · 2024
    Review
  8. Emerging Role of GCN1 in Disease and Homeostasis.International journal of molecular sciences · 2024
    Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Inducible SystemicInternational journal of molecular sciences · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 2 countries.

Yeonjin KimDepartment of Developmental Biology, Harvard School of Dental Medicine, Boston, MA 02115.
Mark S SundrudDepartment of Immunology and Microbiology, The Scripps Research Institute, Jupiter, FL 33458.ORCID 0000-0002-4249-0525
Changqian ZhouDepartment of Developmental Biology, Harvard School of Dental Medicine, Boston, MA 02115.
Maja EdeniusDepartment of Developmental Biology, Harvard School of Dental Medicine, Boston, MA 02115.
Davide ZoccoDepartment of Developmental Biology, Harvard School of Dental Medicine, Boston, MA 02115.
Kristen PowersDepartment of Developmental Biology, Harvard School of Dental Medicine, Boston, MA 02115.ORCID 0000-0003-3486-5371
Miao ZhangDepartment of Developmental Biology, Harvard School of Dental Medicine, Boston, MA 02115.
Ralph MazitschekCenter for Systems Biology, Massachusetts General Hospital, Boston, MA 02114.ORCID 0000-0002-1105-689X
Anjana RaoDivision of Signaling and Gene Expression, La Jolla Institute for Immunology, La Jolla, CA 92037.ORCID 0000-0002-1870-1775
Chang-Yeol YeoDepartment of Life Science, Division of Life and Pharmaceutical Sciences, Ewha Womans University, 03760 Seoul, Korea.
Erika H NossBrigham and Women's Hospital, Harvard Medical School, Boston, MA 02115.
Michael B BrennerBrigham and Women's Hospital, Harvard Medical School, Boston, MA 02115; mbrenner@research.bwh.harvard.edu mwhitman@hms.harvard.edu tkeller@hms.harvard.edu.
Malcolm WhitmanDepartment of Developmental Biology, Harvard School of Dental Medicine, Boston, MA 02115; mbrenner@research.bwh.harvard.edu mwhitman@hms.harvard.edu tkeller@hms.harvard.edu.ORCID 0000-0002-3198-3439
Tracy L KellerDepartment of Developmental Biology, Harvard School of Dental Medicine, Boston, MA 02115; mbrenner@research.bwh.harvard.edu mwhitman@hms.harvard.edu tkeller@hms.harvard.edu.
Harvard University · USBrigham and Women's Hospital · USEwha Womans University · KRLa Jolla Institute for Immunology · USMassachusetts General Hospital · USScripps Research Institute · US

Funding

SIGNAL TRANSDUCTION AND GENE INDUCTION IN T LYMPHOCYTESR01AI040127 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI HOGAN, PATRICK, RAO, ANJANA · 1996 to 2025
$13.3M
Investigating the role of TET deficiency in promoting T cell expansion and inflammationR01AI128589 · NIAID · LA JOLLA INSTITUTE FOR IMMUNOLOGY · PI RAO, ANJANA · 2017 to 2025
$5.3M
Novel Nutrient-sensing Pathway Suppresses Pathologic Tissue RemodelingR21AI142343 · NIAID · HARVARD MEDICAL SCHOOL · PI WHITMAN, MALCOLM R. · 2019 to 2020
$466k
NIAID NIH HHS R01 AI040127NIAID NIH HHS R01 AI128589NIAID NIH HHS R21 AI142343
6 · The paper itself

Abstract

Signaling pathways that sense amino acid abundance are integral to tissue homeostasis and cellular defense. Our laboratory has previously shown that halofuginone (HF) inhibits the prolyl-tRNA synthetase catalytic activity of glutamyl-prolyl-tRNA synthetase (EPRS), thereby activating the amino acid response (AAR). We now show that HF treatment selectively inhibits inflammatory responses in diverse cell types and that these therapeutic benefits occur in cells that lack GCN2, the signature effector of the AAR. Depletion of arginine, histidine, or lysine from cultured fibroblast-like synoviocytes recapitulates key aspects of HF treatment, without utilizing GCN2 or mammalian target of rapamycin complex 1 pathway signaling. Like HF, the threonyl-tRNA synthetase inhibitor borrelidin suppresses the induction of tissue remodeling and inflammatory mediators in cytokine-stimulated fibroblast-like synoviocytes without GCN2, but both aminoacyl-tRNA synthetase (aaRS) inhibitors are sensitive to the removal of GCN1. GCN1, an upstream component of the AAR pathway, binds to ribosomes and is required for GCN2 activation. These observations indicate that aaRS inhibitors, like HF, can modulate inflammatory response without the AAR/GCN2 signaling cassette, and that GCN1 has a role that is distinct from its activation of GCN2. We propose that GCN1 participates in a previously unrecognized amino acid sensor pathway that branches from the canonical AAR.

Indexed as

Amino AcidsAmino Acyl-tRNA SynthetasesAnimalsAnti-Inflammatory AgentsArthritis, RheumatoidCell LineFibroblastsGene Knockdown TechniquesHumansHuman Umbilical Vein Endothelial CellsLungMechanistic Target of Rapamycin Complex 1MiceMice, KnockoutPiperidinesPrimary Cell CultureAmino AcidsAmino Acyl-tRNA SynthetasesAnti-Inflammatory AgentsEIF2AK4 protein, humanEif2ak4 protein, mouseGCN1 protein, humanglutamyl-prolyl-tRNA synthetasehalofuginoneMechanistic Target of Rapamycin Complex 1PiperidinesProtein Serine-Threonine KinasesQuinazolinonesRNA-Binding ProteinsTrans-Activatorsamino acid catabolismaminoacyl-tRNA synthetase (aaRS) inhibitionGCN1GCN2halofuginone (HF)

Identifiers

PMID32253314
PMCPMC7183223
OpenAlexW3014786787

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.