Evidence map›Paper›PMID 32252223›Full record

ArticleInternational journal of molecular sciences2020

In Silico Prediction of the Dissociation Rate Constants of Small Chemical Ligands by 3D-Grid-Based VolSurf Method.

Shuheng Huang, Linxin Chen, Hu Mei, Duo Zhang, Tingting Shi, Zuyin Kuang, Yu Heng, Lei Xu, Xianchao Pan

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Unveiling Glucosinolate Diversity inAntioxidants (Basel, Switzerland) · 2024
    Article
  3. Article
  4. Article
  5. The Physical Chemistry and Chemical Physics (PCCP) Section of theInternational journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Shuheng HuangKey Laboratory of Biorheological Science and Technology (Ministry of Education), Chongqing University, Chongqing 400044, China.
Linxin ChenKey Laboratory of Biorheological Science and Technology (Ministry of Education), Chongqing University, Chongqing 400044, China.
Hu MeiKey Laboratory of Biorheological Science and Technology (Ministry of Education), Chongqing University, Chongqing 400044, China.
Duo ZhangCollege of Bioengineering, Chongqing University, Chongqing 400044, China.
Tingting ShiCollege of Bioengineering, Chongqing University, Chongqing 400044, China.
Zuyin KuangCollege of Bioengineering, Chongqing University, Chongqing 400044, China.
Yu HengCollege of Bioengineering, Chongqing University, Chongqing 400044, China.
Lei XuCollege of Bioengineering, Chongqing University, Chongqing 400044, China.
Xianchao PanCollege of Bioengineering, Chongqing University, Chongqing 400044, China.

Funding

Collaborative Fund of Science and Technology Agency of Luzhou Government and Southwest Medical University 2016LZXNYD-J19Fundamental Research Funds for the Central Universities 106112017CDJQJ238816Graduate Scientific Research and Innovation Foundation of Chongqing CYB19042
6 · The paper itself

Abstract

Accumulated evidence suggests that binding kinetic properties-especially dissociation rate constant or drug-target residence time-are crucial factors affecting drug potency. However, quantitative prediction of kinetic properties has always been a challenging task in drug discovery. In this study, the VolSurf method was successfully applied to quantitatively predict the

Indexed as

Computational BiologyDrug DiscoveryLigandsModels, MolecularSmall Molecule LibrariesSoftwareDrug DesignHSP90 Heat-Shock ProteinsKineticsModels, Theoreticalp38 Mitogen-Activated Protein KinasesProtein BindingQuantitative Structure-Activity RelationshipHSP90 Heat-Shock ProteinsLigandsp38 Mitogen-Activated Protein KinasesSmall Molecule Librariesdissociation rate constantPartial Least SquarespredictionVolSurf

Identifiers

PMID32252223
PMCPMC7177943

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.