Evidence map›Paper›PMID 32251291›Full record

ArticleNature communications2020

Developing a highly efficient hydroxytyrosol whole-cell catalyst by de-bottlenecking rate-limiting steps.

Jun Yao, Yang He, Nannan Su, Sakshibeedu R Bharath, Yong Tao, Jian-Ming Jin, Wei Chen, Haiwei Song, Shuang-Yan Tang

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 100 citations in OpenAlex.

  1. Systems engineering ofSynthetic and systems biotechnology · 2026
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  3. Promiscuity-Guided Enzyme Evolution via Substrate Multiplexed Screening.Angewandte Chemie (International ed. in English) · 2026
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  5. Efficient synthesis of l-DOPA inSynthetic and systems biotechnology · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Jun Yao *CAS Key Laboratory of Microbial Physiological and Metabolic Engineering, State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Yang He *Institute of Molecular and Cell Biology, 61 Biopolis Drive, Singapore, Singapore.
Nannan SuInstitute of Molecular and Cell Biology, 61 Biopolis Drive, Singapore, Singapore.ORCID http://orcid.org/0000-0002-8737-0412
Sakshibeedu R BharathInstitute of Molecular and Cell Biology, 61 Biopolis Drive, Singapore, Singapore.
Yong TaoCAS Key Laboratory of Microbial Physiological and Metabolic Engineering, State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.
Jian-Ming JinBeijing Key Laboratory of Plant Resources Research and Development, Beijing Technology and Business University, Beijing, China. jinjianming@btbu.edu.cn.
Wei ChenCAS Key Laboratory of Microbial Physiological and Metabolic Engineering, State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China. chenw@im.ac.cn.
Haiwei SongInstitute of Molecular and Cell Biology, 61 Biopolis Drive, Singapore, Singapore. haiwei@imcb.a-star.edu.sg.ORCID http://orcid.org/0000-0001-6398-9280
Shuang-Yan TangCAS Key Laboratory of Microbial Physiological and Metabolic Engineering, State Key Laboratory of Microbial Resources, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China. tangsy@im.ac.cn.
Chinese Academy of Sciences · CNInstitute of Molecular and Cell Biology · SGBeijing Technology and Business University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hydroxytyrosol is an antioxidant free radical scavenger that is biosynthesized from tyrosine. In metabolic engineering efforts, the use of the mouse tyrosine hydroxylase limits its production. Here, we design an efficient whole-cell catalyst of hydroxytyrosol in Escherichia coli by de-bottlenecking two rate-limiting enzymatic steps. First, we replace the mouse tyrosine hydroxylase by an engineered two-component flavin-dependent monooxygenase HpaBC of E. coli through structure-guided modeling and directed evolution. Next, we elucidate the structure of the Corynebacterium glutamicum VanR regulatory protein complexed with its inducer vanillic acid. By switching its induction specificity from vanillic acid to hydroxytyrosol, VanR is engineered into a hydroxytyrosol biosensor. Then, with this biosensor, we use in vivo-directed evolution to optimize the activity of tyramine oxidase (TYO), the second rate-limiting enzyme in hydroxytyrosol biosynthesis. The final strain reaches a 95% conversion rate of tyrosine. This study demonstrates the effectiveness of sequentially de-bottlenecking rate-limiting steps for whole-cell catalyst development.

Indexed as

Metabolic EngineeringBacterial ProteinsBiosensing TechniquesBiosynthetic PathwaysCorynebacterium glutamicumDirected Molecular EvolutionEscherichia coliEscherichia coli ProteinsFeasibility StudiesFree Radical ScavengersMixed Function OxygenasesMutagenesis, Site-DirectedMutationPhenylethyl AlcoholTranscription FactorsTyrosine3,4-dihydroxyphenylethanol4-hydroxyphenylacetate 3-monooxygenaseBacterial ProteinsEscherichia coli ProteinsFree Radical ScavengersMixed Function OxygenasesPhenylethyl AlcoholTranscription FactorsTyrosineTyrosine 3-MonooxygenaseVanillic AcidVanR protein, bacteria

Identifiers

PMID32251291
PMCPMC7090077
OpenAlexW3012604428

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.