Evidence map›Paper›PMID 32250121›Full record

ArticleJournal of proteome research2020

Fast and Highly Efficient Affinity Enrichment of Azide-A-DSBSO Cross-Linked Peptides.

Manuel Matzinger, Wolfgang Kandioller, Philipp Doppler, Elke H Heiss, Karl Mechtler

Open access · hybridAbstract read
In one paragraph

Article in Journal of proteome research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 40 citations in OpenAlex.

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  14. MS Annika: A New Cross-Linking Search Engine.Journal of proteome research · 2021
    Article
  15. Review
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Manuel MatzingerDepartment of Pharmacognosy, Faculty of Life Sciences, University of Vienna, 1090 Vienna, Austria.ORCID 0000-0002-9765-7951
Wolfgang KandiollerInstitute of Inorganic Chemistry, Faculty of Chemistry, University of Vienna, 1090 Vienna, Austria.ORCID 0000-0002-5630-712X
Philipp DopplerInstitute of Chemical, Environmental and Bioscience Engineering, Vienna University of Technology, 1040 Vienna, Austria.
Elke H HeissDepartment of Pharmacognosy, Faculty of Life Sciences, University of Vienna, 1090 Vienna, Austria.
Karl MechtlerInstitute of Molecular Pathology (IMP), Vienna BioCenter (VBC), 1030 Vienna, Austria.ORCID 0000-0002-3392-9946
University of Vienna · ATInstitute of Molecular Biotechnology · ATTU Wien · AT

Funding

Austrian Science Fund FWF I 3686Austrian Science Fund FWF P 29392
6 · The paper itself

Abstract

Cross-linking mass spectrometry is an increasingly used, powerful technique to study protein-protein interactions or to provide structural information. Due to substochiometric reaction efficiencies, cross-linked peptides are usually low abundance. This results in challenging data evaluation and the need for an effective enrichment. Here we describe an improved, easy to implement, one-step method to enrich azide-tagged, acid-cleavable disuccinimidyl bis-sulfoxide (DSBSO) cross-linked peptides using dibenzocyclooctyne (DBCO) coupled Sepharose beads. We probed this method using recombinant Cas9 and

Indexed as

AzidesEscherichia coliCross-Linking ReagentsPeptidesSulfoxidesAzidesCross-Linking ReagentsPeptidesSulfoxidesaffinity enrichmentclick reactioncross-linkingDBCODSBSOmass spectrometry

Identifiers

PMID32250121
PMCPMC7199212
OpenAlexW3014512417

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.