Evidence map›Paper›PMID 32247021›Full record

ArticleGastroenterology2020

Retinoic Acid and Lymphotoxin Signaling Promote Differentiation of Human Intestinal M Cells.

Siyuan Ding, Yanhua Song, Kevin F Brulois, Junliang Pan, Julia Y Co, Lili Ren, Ningguo Feng, Linda L Yasukawa, Liliana Sánchez-Tacuba, Jonathan E Wosen and 6 more

Open access · greenAbstract read
In one paragraph

Article in Gastroenterology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
2.8field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Fibroblast diversity within human gut-associated lymphoid tissues.The Journal of experimental medicine · 2026
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Review
  14. Gut microbes · 2023
    Article
  15. Review
  16. Intestinal Peyer's Patches: Structure, Function, and In Vitro Modeling.Tissue engineering and regenerative medicine · 2023
    Review
  17. Gastrointestinal organoids in the study of viral infections.American journal of physiology. Gastrointestinal and liver physiology · 2023
    Review
  18. Article
  19. CD169Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  20. Mechanisms for the Invasion and Dissemination ofThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2022
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 2 countries.

Siyuan DingDepartment of Molecular Microbiology, Washington University School of Medicine, St Louis, Missouri. Electronic address: siyuan.ding@wustl.edu.
Yanhua SongPalo Alto Veterans Institute of Research, VA Palo Alto Health Care System, Palo Alto, California; Department of Medicine, Division of Gastroenterology and Hepatology, Stanford University, Stanford, California; Department of Microbiology and Immunology, Stanford University, Stanford, California; Institute of Veterinary Medicine, Jiangsu Academy of Agricultural Sciences, Nanjing, China.
Kevin F BruloisPalo Alto Veterans Institute of Research, VA Palo Alto Health Care System, Palo Alto, California; Department of Pathology, Stanford University, Stanford, California.
Junliang PanPalo Alto Veterans Institute of Research, VA Palo Alto Health Care System, Palo Alto, California; Department of Pathology, Stanford University, Stanford, California.
Julia Y CoDepartment of Microbiology and Immunology, Stanford University, Stanford, California; Department of Pediatrics, Stanford University, Stanford, California.
Lili RenSchool of Pharmaceutical Sciences, Nanjing Tech University, Nanjing, China.
Ningguo FengPalo Alto Veterans Institute of Research, VA Palo Alto Health Care System, Palo Alto, California; Department of Medicine, Division of Gastroenterology and Hepatology, Stanford University, Stanford, California; Department of Microbiology and Immunology, Stanford University, Stanford, California.
Linda L YasukawaPalo Alto Veterans Institute of Research, VA Palo Alto Health Care System, Palo Alto, California; Department of Medicine, Division of Gastroenterology and Hepatology, Stanford University, Stanford, California; Department of Microbiology and Immunology, Stanford University, Stanford, California.
Liliana Sánchez-TacubaPalo Alto Veterans Institute of Research, VA Palo Alto Health Care System, Palo Alto, California; Department of Medicine, Division of Gastroenterology and Hepatology, Stanford University, Stanford, California; Department of Microbiology and Immunology, Stanford University, Stanford, California.
Jonathan E WosenDepartment of Pediatrics, Stanford University, Stanford, California.
Elizabeth D MellinsDepartment of Pediatrics, Stanford University, Stanford, California.
Denise M MonackDepartment of Microbiology and Immunology, Stanford University, Stanford, California.
Manuel R AmievaDepartment of Microbiology and Immunology, Stanford University, Stanford, California; Department of Pediatrics, Stanford University, Stanford, California.
Calvin J KuoDepartment of Medicine, Division of Hematology, Stanford University, Stanford, California.
Eugene C ButcherPalo Alto Veterans Institute of Research, VA Palo Alto Health Care System, Palo Alto, California; Department of Pathology, Stanford University, Stanford, California.
Harry B GreenbergPalo Alto Veterans Institute of Research, VA Palo Alto Health Care System, Palo Alto, California; Department of Medicine, Division of Gastroenterology and Hepatology, Stanford University, Stanford, California; Department of Microbiology and Immunology, Stanford University, Stanford, California. Electronic address: hbgreen@stanford.edu.
VA Palo Alto Health Care System · USStanford University · USNanjing Tech University · CNWashington University in St. Louis · US

Funding

Stanford/UNC Biomimetic U19 Research CenterU19AI116484 · NIAID · STANFORD UNIVERSITY · PI GREENBERG, HARRY BERNARD · 2015 to 2025
$13.5M
UCSF Project 1U54CA224081 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CALVIN J KUO · 2017 to 2026
$12.9M
Regulation of actively proliferating and quiescent intestinal stem cellsU01DK085527 · NIDDK · STANFORD UNIVERSITY · PI KUO, CALVIN J · 2009 to 2023
$6.9M
Intestinal Stem Cell Consortium Coordinating CenterU01DK085532 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2009 to 2018
$6.5M
Limited Competition for the Continuation of the Intestinal Stem Cell Consortium Coordinating CenterU24DK085532 · NIDDK · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI NILAND, JOYCE CAROL · 2019 to 2023
$2.3M
Regulation of Rotavirus Replication, Virulence, and Host Range Restriction by the Innate Immune SystemR01AI125249 · NIAID · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI GREENBERG, HARRY BERNARD · 2017 to 2021
$2.1M
Interferon-Stimulated Gene Inhibition of Rotavirus Replication and Viral AntagonismR01AI150796 · NIAID · WASHINGTON UNIVERSITY · PI DING, SIYUAN · 2020 to 2024
$2.0M
Genetic and Biochemical Interrogation of Rotavirus-Cohesin InteractionR00AI135031 · NIAID · WASHINGTON UNIVERSITY · PI DING, SIYUAN · 2020 to 2021
$498k
Genetic and Biochemical Interrogation of Rotavirus-Cohesin InteractionK99AI135031 · NIAID · STANFORD UNIVERSITY · PI DING, SIYUAN · 2018 to 2018
$132k
Rotavirus: Studies of the Effectors and Mechanisms of Heterotypic Humoral Immunity in Human Intestinal Epithelial CellsI01BX000158 · VA · VETERANS ADMIN PALO ALTO HEALTH CARE SYS · PI GREENBERG, HARRY BERNARD · 2011 to 2022
–
BLRD VA I01 BX000158NCI NIH HHS U54 CA224081NIAID NIH HHS K99 AI135031NIAID NIH HHS R00 AI135031NIAID NIH HHS R01 AI125249NIAID NIH HHS R01 AI150796NIAID NIH HHS U19 AI116484NIDDK NIH HHS U01 DK085527NIDDK NIH HHS U01 DK085532NIDDK NIH HHS U24 DK085532
6 · The paper itself

Abstract

BACKGROUND &

aimsIntestinal microfold (M) cells are a unique subset of intestinal epithelial cells in the Peyer's patches that regulate mucosal immunity, serving as portals for sampling and uptake of luminal antigens. The inability to efficiently develop human M cells in cell culture has impeded studies of the intestinal immune system. We aimed to identify signaling pathways required for differentiation of human M cells and establish a robust culture system using human ileum enteroids.

methodsWe analyzed transcriptome data from mouse Peyer's patches to identify cell populations in close proximity to M cells. We used the human enteroid system to determine which cytokines were required to induce M-cell differentiation. We performed transcriptome, immunofluorescence, scanning electron microscope, and transcytosis experiments to validate the development of phenotypic and functional human M cells.

resultsA combination of retinoic acid and lymphotoxin induced differentiation of glycoprotein 2-positive human M cells, which lack apical microvilli structure. Upregulated expression of innate immune-related genes within M cells correlated with a lack of viral antigens after rotavirus infection. Human M cells, developed in the enteroid system, internalized and transported enteric viruses, such as rotavirus and reovirus, across the intestinal epithelium barrier in the enteroids.

conclusionsWe identified signaling pathways required for differentiation of intestinal M cells, and used this information to create a robust culture method to develop human M cells with capacity for internalization and transport of viruses. Studies of this model might increase our understanding of antigen presentation and the systemic entry of enteric pathogens in the human intestine.

Indexed as

AnimalsAntigen PresentationCell Culture TechniquesCell DifferentiationEpithelial CellsHumansIleumImmunity, MucosalIntestinal MucosaLymphotoxin-alphaMiceNF-kappa BOrganoidsPeyer's PatchesPrimary Cell CultureRecombinant ProteinsLymphotoxin-alphaNF-kappa BRecombinant ProteinsTretinoinIntestinal EnteroidsMucosal ImmunityRotavirus

Identifiers

PMID32247021
PMCPMC7569531
OpenAlexW3014877928

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.