Evidence map›Paper›PMID 32246281›Full record

ArticleJournal of plant research2020

Root-knot nematodes modulate cell walls during root-knot formation in Arabidopsis roots.

Takashi Ishida, Reira Suzuki, Satoru Nakagami, Takeshi Kuroha, Shingo Sakamoto, Miyuki T Nakata, Ryusuke Yokoyama, Seisuke Kimura, Nobutaka Mitsuda, Kazuhiko Nishitani and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of plant research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Identification of genes involved inPlant biotechnology (Tokyo, Japan) · 2021
    Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Takashi IshidaInternational Research Organization for Advanced Science and Technology (IROAST), Kumamoto University, Kurokami 2-39-1, Kumamoto, 860-8555, Japan. ishida-takashi@kumamoto-u.ac.jp.ORCID http://orcid.org/0000-0001-5167-9971
Reira SuzukiGraduate School of Science and Technology, Kumamoto University, Kumamoto, Japan.
Satoru NakagamiGraduate School of Science and Technology, Kumamoto University, Kumamoto, Japan.
Takeshi KurohaGraduate School of Life Sciences, Tohoku University, Sendai, Japan.
Shingo SakamotoBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan.
Miyuki T NakataBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan.
Ryusuke YokoyamaGraduate School of Life Sciences, Tohoku University, Sendai, Japan.
Seisuke KimuraDepartment of Industrial Life Sciences, Faculty of Life Sciences, Kyoto Sangyo University, Kyoto, Japan.
Nobutaka MitsudaBioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba, Ibaraki, Japan.
Kazuhiko NishitaniGraduate School of Life Sciences, Tohoku University, Sendai, Japan.
Shinichiro SawaGraduate School of Science and Technology, Kumamoto University, Kumamoto, Japan.

Funding

Advanced Low Carbon Technology Research and Development Program (JP) JPMJAL1107Japan Society for the Promotion of Science 14J40052Japan Society for the Promotion of Science 16K14757Japan Society for the Promotion of Science 17H03967Japan Society for the Promotion of Science 18H04787Japan Society for the Promotion of Science 18H04844Japan Society for the Promotion of Science 18H05487Japan Society for the Promotion of Science 24114009Japan Society for the Promotion of Science 24370024Japan Society for the Promotion of Science 25119713Japan Society for the Promotion of Science 25440134Japan Society for the Promotion of Science 26440151Ministry of Education, Culture, Sports, Science and Technology S1511023
6 · The paper itself

Abstract

Phytoparasitic nematodes parasitize many species of rooting plants to take up nutrients, thus causing severe growth defects in the host plants. During infection, root-knot nematodes induce the formation of a characteristic hyperplastic structure called a root-knot or gall on the roots of host plants. Although many previous studies addressed this abnormal morphogenesis, the underlying mechanisms remain uncharacterized. To analyze the plant-microorganism interaction at the molecular level, we established an in vitro infection assay system using the nematode Meloidogyne incognita and the model plant Arabidopsis thaliana. Time-course mRNA-seq analyses indicated the increased levels of procambium-associated genes in the galls, suggesting that vascular stem cells play important roles in the gall formation. Conversely, genes involved in the formation of secondary cell walls were decreased in galls. A neutral sugar analysis indicated that the level of xylan, which is one of the major secondary cell wall components, was dramatically reduced in the galls. These observations were consistent with the hypothesis of a decrease in the number of highly differentiated cells and an increase in the density of undifferentiated cells lead to gall formation. Our findings suggest that phytoparasitic nematodes modulate the developmental mechanisms of the host to modify various aspects of plant physiological processes and establish a feeding site.

Indexed as

AnimalsArabidopsisCell WallGene Expression Regulation, PlantHost-Parasite InteractionsNematodaPlant DiseasesPlant RootsNeutral sugar analysisPlant–microorganism interactionRoot-knot formationRoot-knot nematodesSecondary cell wall

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.