Evidence map›Paper›PMID 32246017›Full record

ArticleScientific reports2020

The conifer root rot pathogens Heterobasidion irregulare and Heterobasidion occidentale employ different strategies to infect Norway spruce.

Yang Hu, Malin Elfstrand, Jan Stenlid, Mikael Brandström Durling, Åke Olson

Abstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yang HuZhejiang Academy of Forestry, Liuhe Road, 310023, Hangzhou, China.
Malin ElfstrandDepartment of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 05, Uppsala, Sweden.
Jan StenlidDepartment of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 05, Uppsala, Sweden.
Mikael Brandström DurlingDepartment of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 05, Uppsala, Sweden.ORCID http://orcid.org/0000-0001-6485-197X
Åke OlsonDepartment of Forest Mycology and Plant Pathology, Swedish University of Agricultural Sciences, Box 7026, 750 05, Uppsala, Sweden. ake.olson@slu.se.ORCID http://orcid.org/0000-0001-8998-6096

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heterobasidion irregulare and H. occidentale are two closely related conifer root rot pathogens in the H. annosum sensu lato (s.l.) species complex. The two species H. irregulare and H. occidentale have different host preference with pine and non-pine tree species favored, respectively. The comparison of transcriptomes of H. irregulare and H. occidentale growing in Norway spruce bark, a susceptible host non-native to North America, showed large differences in gene expression. Heterobasidion irregulare induced more genes involved in detoxification of host compounds and in production of secondary metabolites, while the transcriptome induced in H. occidentale was more oriented towards carbohydrate degradation. Along with their separated evolutionary history, the difference might be driven by their host preferences as indicated by the differentially expressed genes enriched in particular Gene Ontology terms.

Indexed as

BasidiomycotaGene Expression Regulation, PlantGenome, FungalPiceaPlant BarkPlant DiseasesPlant RootsVirulence

Identifiers

PMID32246017
PMCPMC7125170

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.