Evidence map›Paper›PMID 32244552›Full record

ArticleGenes2020

Increasing the Genetic Diagnosis Yield in Inherited Retinal Dystrophies: Assigning Pathogenicity to Novel Non-canonical Splice Site Variants.

Vasileios Toulis, Vianney Cortés-González, Marta de Castro-Miró, Juliana Ferraz Sallum, Jaume Català-Mora, Cristina Villanueva-Mendoza, Marcela Ciccioli, Roser Gonzàlez-Duarte, Rebeca Valero, Gemma Marfany

Open access · goldAbstract read
In one paragraph

Article in Genes, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

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  8. Clinical Characteristics ofInternational journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Vasileios ToulisDBGen Ocular Genomics, 08011 Barcelona, Spain.
Vianney Cortés-GonzálezDBGen Ocular Genomics, 08011 Barcelona, Spain.
Marta de Castro-MiróDBGen Ocular Genomics, 08011 Barcelona, Spain.
Juliana Ferraz SallumInstituto de Genética Ocular and Ophthalmology Department Federal University of São Paulo (UNIFESP), São Paulo 04552-050, Brazil.
Jaume Català-MoraHospital Sant Joan de Deu, Esplugues de Llobregat, 08950 Barcelona, Spain.
Cristina Villanueva-MendozaDepartamento de Genética, Asociación para Evitar la Ceguera en México, Ciudad de México 04030, Mexico.
Marcela CiccioliStargardt APNES-Retina, Buenos Aires, Argentina.
Roser Gonzàlez-DuarteDBGen Ocular Genomics, 08011 Barcelona, Spain.
Rebeca ValeroDBGen Ocular Genomics, 08011 Barcelona, Spain.
Gemma MarfanyDBGen Ocular Genomics, 08011 Barcelona, Spain.
Oryzon Genomics (Spain) · ESAsociacion Para Evitar la Ceguera en México Hospital Dr. Luis Sánchez Bulnes · MXHospital Sant Joan de Déu Barcelona · ESInstituto de Salud Carlos III · ESUniversidade Federal de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimsWe aimed to validate the pathogenicity of genetic variants identified in inherited retinal dystrophy (IRD) patients, which were located in non-canonical splice sites (NCSS).

methodsAfter next generation sequencing (NGS) analysis (target gene panels or whole exome sequencing (WES)), NCSS variants were prioritized according to

resultsFour novel NCSS variants have been identified. They are located in intron 33 and 34 of

conclusionsOur data increase the genetic diagnostic yield of IRD patients and expand the landscape of pathogenic variants, which will have an impact on the genotype-phenotype correlations and allow patients to opt for the emerging gene and cell therapies.

Indexed as

MutationAdultATP-Binding Cassette TransportersCell Cycle ProteinsChildExome SequencingFemaleGTP-Binding ProteinsHumansMaleMembrane ProteinsRetinal DystrophiesRNA SplicingYoung AdultABCA4 protein, humanATP-Binding Cassette TransportersCell Cycle ProteinsGTP-Binding ProteinsMembrane ProteinsPOC1B protein, humanRP2 protein, humanaberrant splicinginherited retinal dystrophiesminigenesnon-canonical splice sites

Identifiers

PMID32244552
PMCPMC7231145
OpenAlexW3015030211

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.