Evidence map›Paper›PMID 32243837›Full record

ArticleCancer cell2020

KMT2D Deficiency Impairs Super-Enhancers to Confer a Glycolytic Vulnerability in Lung Cancer.

Hunain Alam, Ming Tang, Mayinuer Maitituoheti, Shilpa S Dhar, Manish Kumar, Chae Young Han, Chandrashekar R Ambati, Samir B Amin, Bingnan Gu, Tsai-Yu Chen and 9 more

Open access · bronzeAbstract read
In one paragraph

Article in Cancer cell, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 167 papers.

0numbers the graph read from it
0cells of the map it votes in
167citing papers in PubMed
14.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

167 citing papers in PubMed, 235 citations in OpenAlex.

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107 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 4 institutions in 1 country.

Hunain AlamDepartment of Molecular & Cellular Oncology, The University of Texas MD Anderson Cancer Center, 1515 Holcombe Boulevard, Houston, TX 77030, USA.
Ming TangDepartment of Genomic Medicine, The University of Texas MD Anderson Cancer Center, 1901 East Road, Houston, TX 77054, USA.
Mayinuer MaitituohetiDepartment of Genomic Medicine, The University of Texas MD Anderson Cancer Center, 1901 East Road, Houston, TX 77054, USA.
Shilpa S DharDepartment of Molecular & Cellular Oncology, The University of Texas MD Anderson Cancer Center, 1515 Holcombe Boulevard, Houston, TX 77030, USA.
Manish KumarDepartment of Molecular & Cellular Oncology, The University of Texas MD Anderson Cancer Center, 1515 Holcombe Boulevard, Houston, TX 77030, USA.
Chae Young HanDepartment of Molecular & Cellular Oncology, The University of Texas MD Anderson Cancer Center, 1515 Holcombe Boulevard, Houston, TX 77030, USA.
Chandrashekar R AmbatiAdvanced Technology Core and Department of Molecular and Cell Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Samir B AminDepartment of Genomic Medicine, The University of Texas MD Anderson Cancer Center, 1901 East Road, Houston, TX 77054, USA.
Bingnan GuDepartment of Molecular & Cellular Oncology, The University of Texas MD Anderson Cancer Center, 1515 Holcombe Boulevard, Houston, TX 77030, USA.
Tsai-Yu ChenDepartment of Molecular & Cellular Oncology, The University of Texas MD Anderson Cancer Center, 1515 Holcombe Boulevard, Houston, TX 77030, USA.
Yu-Hsi LinDepartment of Cancer Systems Imaging, The University of Texas MD Anderson Cancer Center, 1881 East Road, Houston, TX 77054, USA.
Jichao ChenDepartment of Pulmonary Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Florian L MullerDepartment of Cancer Systems Imaging, The University of Texas MD Anderson Cancer Center, 1881 East Road, Houston, TX 77054, USA.
Nagireddy PutluriAdvanced Technology Core and Department of Molecular and Cell Biology, Baylor College of Medicine, Houston, TX 77030, USA.
Elsa R FloresDepartment of Molecular Oncology and Cancer Biology and Evolution Program, Moffitt Cancer Center, 12902 Magnolia Drive, Tampa, FL 33612, USA.
Francesco J DeMayoReproductive and Developmental Biology Laboratory, The National Institute of Environmental Health Sciences, 111 T.W. Alexander Drive, Research Triangle Park, NC 27709, USA.
Laura BaselerDepartment of Veterinary Medicine & Surgery, The University of Texas MD Anderson Cancer Center, 1515 Holcombe Boulevard, Houston, TX 77030, USA.
Kunal RaiDepartment of Genomic Medicine, The University of Texas MD Anderson Cancer Center, 1901 East Road, Houston, TX 77054, USA. Electronic address: KRai@mdanderson.org.
Min Gyu LeeDepartment of Molecular & Cellular Oncology, The University of Texas MD Anderson Cancer Center, 1515 Holcombe Boulevard, Houston, TX 77030, USA. Electronic address: mglee@mdanderson.org.
The University of Texas MD Anderson Cancer Center · USBaylor College of Medicine · USMoffitt Cancer Center · USNational Institute of Environmental Health Sciences · US

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI DIANE BODURKA · 1985 to 2026
$290.8M
Identification of non-coding RNAs to therapeutically target undruggable pathways in metastatic lung adenocarcinoma and squamous cell carcinomaR35CA197452 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI FLORES, ELSA R · 2016 to 2022
$6.4M
Role of AT1 cells in perinatal lung maturationR01HL130129 · NHLBI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI CHEN, JICHAO · 2016 to 2023
$4.1M
Identify the DNA Adduct and Associated Metabolic Alterations in Bladder Cancer of SmokersR01CA216426 · NCI · BAYLOR COLLEGE OF MEDICINE · PI EL-ZEIN, RANDA A, PUTLURI, NAGIREDDY · 2018 to 2022
$2.0M
Role of the Histone Methyltransferase MLL4 in MedulloblastomaR01CA207109 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI LEE, MIN GYU · 2017 to 2021
$1.9M
Role of the Histone Modifier KDM2A in Lung CancerR01CA207098 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI LEE, MIN GYU · 2017 to 2021
$1.8M
Role of KMT2D and aberrant enhancers in modulating tumor microenvironment in melanomaR01CA222214 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RAI, KUNAL · 2018 to 2022
$1.8M
Racial Disparity in Bladder Cancer and Identification of Altered Metabolism in African American Compare to European Bladder CancerR01CA220297 · NCI · BAYLOR COLLEGE OF MEDICINE · PI PUTLURI, NAGIREDDY · 2017 to 2021
$1.8M
Role of the Histone demethylase JARID1d in Epigenetic Events of Prostate CancerR01CA157919 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI LEE, MIN GYU · 2011 to 2015
$1.5M
Epigenetics of Melanoma MetastasisR00CA160578 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RAI, KUNAL · 2015 to 2017
$747k
Epigenetics of Melanoma MetastasisK99CA160578 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI RAI, KUNAL · 2011 to 2012
$284k
NCI NIH HHS K99 CA160578NCI NIH HHS P30 CA016672NCI NIH HHS R00 CA160578NCI NIH HHS R01 CA157919NCI NIH HHS R01 CA207098NCI NIH HHS R01 CA207109NCI NIH HHS R01 CA216426NCI NIH HHS R01 CA220297NCI NIH HHS R01 CA222214NCI NIH HHS R35 CA197452NHLBI NIH HHS R01 HL130129
6 · The paper itself

Abstract

Epigenetic modifiers frequently harbor loss-of-function mutations in lung cancer, but their tumor-suppressive roles are poorly characterized. Histone methyltransferase KMT2D (a COMPASS-like enzyme, also called MLL4) is among the most highly inactivated epigenetic modifiers in lung cancer. Here, we show that lung-specific loss of Kmt2d promotes lung tumorigenesis in mice and upregulates pro-tumorigenic programs, including glycolysis. Pharmacological inhibition of glycolysis preferentially impedes tumorigenicity of human lung cancer cells bearing KMT2D-inactivating mutations. Mechanistically, Kmt2d loss widely impairs epigenomic signals for super-enhancers/enhancers, including the super-enhancer for the circadian rhythm repressor Per2. Loss of Kmt2d decreases expression of PER2, which regulates multiple glycolytic genes. These findings indicate that KMT2D is a lung tumor suppressor and that KMT2D deficiency confers a therapeutic vulnerability to glycolytic inhibitors.

Indexed as

Enhancer Elements, GeneticGene Expression Regulation, NeoplasticGlycolysisAdenocarcinoma of LungAnimalsAntimetabolitesApoptosisBiomarkers, TumorCell ProliferationDeoxyglucoseDNA-Binding ProteinsHistone-Lysine N-MethyltransferaseHistonesHumansLung NeoplasmsMiceAntimetabolitesBiomarkers, TumorDeoxyglucoseDNA-Binding ProteinsHistone-Lysine N-MethyltransferaseHistonesKMT2D protein, humanKmt2d protein, mouseMyeloid-Lymphoid Leukemia ProteinNeoplasm ProteinsPER2 protein, humanPeriod Circadian Proteinsepigenetic modifierglycolysishistone methylationhistone methyltransferaseinhibitorKMT2Dlung cancermetabolismsuper-enhancertumor suppressor

Identifiers

PMID32243837
PMCPMC7178078
OpenAlexW3014830213

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.