Evidence map›Paper›PMID 32243066›Full record

ArticleMolecular oncology2020

SST gene hypermethylation acts as a pan-cancer marker for pancreatic ductal adenocarcinoma and multiple other tumors: toward its use for blood-based diagnosis.

Mehdi Manoochehri, Yenan Wu, Nathalia A Giese, Oliver Strobel, Stefanie Kutschmann, Florian Haller, Jörg D Hoheisel, Evgeny A Moskalev, Thilo Hackert, Andrea S Bauer

Open access · goldAbstract read
In one paragraph

Article in Molecular oncology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
1.7field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 77 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Mehdi ManoochehriDivision of Functional Genome Analysis, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0002-2097-2558
Yenan WuDivision of Functional Genome Analysis, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Nathalia A GieseDepartment of General Surgery, University Hospital Heidelberg, Germany.
Oliver StrobelDepartment of General Surgery, University Hospital Heidelberg, Germany.
Stefanie KutschmannDivision of Functional Genome Analysis, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Florian HallerDiagnostic Molecular Pathology, Institute of Pathology, Friedrich-Alexander University, Erlangen, Germany.
Jörg D HoheiselDivision of Functional Genome Analysis, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Evgeny A MoskalevDiagnostic Molecular Pathology, Institute of Pathology, Friedrich-Alexander University, Erlangen, Germany.
Thilo HackertDepartment of General Surgery, University Hospital Heidelberg, Germany.
Andrea S BauerDivision of Functional Genome Analysis, German Cancer Research Center (DKFZ), Heidelberg, Germany.
German Cancer Research Center · DEHeidelberg University · DEFriedrich-Alexander-Universität Erlangen-Nürnberg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aberrant DNA methylation is often involved in carcinogenesis. Our initial goal was to identify DNA methylation biomarkers associated with pancreatic cancer. A genomewide methylation study was performed on DNA from pancreatic ductal adenocarcinoma (PDAC) and endocrine pancreas tumors. Validation of DNA methylation patterns and concomitant alterations in expression of gene candidates was performed on patient samples and pancreatic cancer cell lines. Furthermore, validation was done on independent data from The Cancer Genome Atlas (TCGA) and Gene Expression Omnibus (GEO). Finally, droplet digital PCR was employed to detect DNA methylation marks in cell-free (cf) DNA isolated from plasma samples of PDAC patients and cancer-free blood donors. Hypermethylation of the SST gene (encoding somatostatin) and concomitant downregulation of its expression were discovered in PDAC and endocrine tumor tissues while not being present in chronic pancreatitis (inflamed) tissues and normal pancreas. Fittingly, treatment with a somatostatin agonist (octreotide) reduced cell proliferation and migration of pancreatic cancer cells. Diagnostic performance of SST methylation in a receiver operating characteristic curve analysis was 100% and 89% for tissue and plasma samples, respectively. A large body of TCGA and GEO data confirmed SST hypermethylation and downregulation in PDAC and showed a similar effect in a broad spectrum of other tumor entities. SST promoter methylation represents a sensitive and promising molecular, pan-cancer biomarker detectable in tumor tissue, and liquid biopsy samples.

Indexed as

AdenocarcinomaBiomarkers, TumorCarcinoma, Pancreatic DuctalCell MovementCell ProliferationDNA MethylationDown-RegulationGene Expression Regulation, NeoplasticGenetic LociGenome, HumanHumansKaplan-Meier EstimatePancreatic NeoplasmsPrincipal Component AnalysisPrognosisReproducibility of ResultsBiomarkers, TumorSomatostatinbiomarkerDNA methylationgene expressionliquid biopsypancreatic cancersolid tumorssomatostatin

Identifiers

PMID32243066
PMCPMC7266283
OpenAlexW3015081467

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.