Evidence map›Paper›PMID 32242058›Full record

ArticleCommunications biology2020

Pan-cancer molecular analysis of the RB tumor suppressor pathway.

Erik S Knudsen, Ram Nambiar, Spencer R Rosario, Dominic J Smiraglia, David W Goodrich, Agnieszka K Witkiewicz

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 81 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
81citing papers in PubMed, 1 pooled it
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

81 citing papers in PubMed, 1 synthesis or guideline pooled it, 114 citations in OpenAlex.

  1. Pooled it
  2. Phase I/II Study of the Aurora Kinase A Inhibitor Alisertib and Pembrolizumab in Refractory, Rb-Deficient Head and Neck Squamous Cell Carcinomas.Clinical cancer research : an official journal of the American Association for Cancer Research · 2025
    Trial
  3. Article
  4. Article
  5. Review
  6. Dual Inhibition of TRIP13 and Aurora A Induces Mitotic DNA Damage and Concurrent Pyroptotic-Apoptotic Cell Death in Rb-Deficient Cancer Cells.Clinical cancer research : an official journal of the American Association for Cancer Research · 2026
    Article
  7. Review
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Copy Number Alteration Profiling from Plasma cfDNA WES in Advanced NSCLC.International journal of molecular sciences · 2025
    Article
  18. Article
  19. Article
  20. Article

21 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 2 countries.

Erik S KnudsenRoswell Park Comprehensive Cancer Center, Buffalo, NY, 14203, USA. erik.knudsen@roswellpark.org.
Ram NambiarRoswell Park Comprehensive Cancer Center, Buffalo, NY, 14203, USA.
Spencer R RosarioRoswell Park Comprehensive Cancer Center, Buffalo, NY, 14203, USA.
Dominic J SmiragliaRoswell Park Comprehensive Cancer Center, Buffalo, NY, 14203, USA.ORCID http://orcid.org/0000-0001-8852-1510
David W GoodrichRoswell Park Comprehensive Cancer Center, Buffalo, NY, 14203, USA.ORCID http://orcid.org/0000-0002-1021-1827
Agnieszka K WitkiewiczRoswell Park Comprehensive Cancer Center, Buffalo, NY, 14203, USA. agnieszka.witkiewicz@roswellpark.org.
Roswell Park Comprehensive Cancer Center · US

Funding

Enabling Access to Cutting-Edge Biomedical and Behavioral ScienceR25GM095459 · NIGMS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI DUBOCOVICH, MARGARITA L · 2012 to 2021
$4.4M
Role of the RB tumor suppressor in liver tumorigenesisR01CA127387 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI KNUDSEN, ERIK · 2008 to 2019
$3.6M
NOTCH signaling controls transformation to androgen independent neuroendocrine prostate cancerR01CA234162 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI GOODRICH, DAVID W. · 2019 to 2024
$3.0M
Exploiting RB1 deficiency for the treatment of lethal neuroendocrine prostate cancerR01CA207757 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI ELLIS, LEIGH, GOODRICH, DAVID W. · 2016 to 2020
$2.8M
Common Genetically Altered Pathways as Targets for Therapy in Pancreatic CancerR01CA211878 · NCI · UNIVERSITY OF ARIZONA · PI KNUDSEN, ERIK, WITKIEWICZ, AGNIESZKA · 2017 to 2021
$1.9M
Pathway Heterogeneity: Etiology and Treatment of TNBCR01CA188650 · NCI · UT SOUTHWESTERN MEDICAL CENTER · PI KNUDSEN, ERIK · 2014 to 2018
$1.7M
NCI NIH HHS R01 CA127387NCI NIH HHS R01 CA188650NCI NIH HHS R01 CA207757NCI NIH HHS R01 CA211878NCI NIH HHS R01 CA234162NIGMS NIH HHS R25 GM095459
6 · The paper itself

Abstract

The retinoblastoma tumor suppressor gene (RB1) plays a critical role in coordinating multiple pathways that impact cancer initiation, disease progression, and therapeutic responses. Here we probed molecular features associated with the RB-pathway across 31 tumor-types. While the RB-pathway has been purported to exhibit multiple mutually exclusive genetic events, only RB1 alteration is mutually exclusive with deregulation of CDK4/6 activity. An ER+ breast cancer model with targeted RB1 deletion was used to identify signatures of CDK4/6 activity and RB-dependency (CDK4/6-RB integrated signature). This signature was prognostic in tumor-types with gene expression features indicative of slower growth. Single copy loss on chromosome 13q encompassing the RB1 locus is prevalent in many cancers, yielding reduced expression of multiple genes in cis, and is inversely related to the CDK4/6-RB integrated signature supporting a cause-effect relationship. Genes that are positively and inversely correlated with the CDK4/6-RB integrated signature define new tumor-specific pathways associated with RB-pathway activity.

Indexed as

Chromosomes, Human, Pair 13Biomarkers, TumorCell ProliferationCyclin-Dependent Kinase 4Cyclin-Dependent Kinase 6Databases, GeneticDisease ProgressionGene Expression ProfilingGene Expression Regulation, NeoplasticHumansPrognosisRetinal NeoplasmsRetinoblastomaRetinoblastoma Binding ProteinsSignal TransductionTranscriptomeBiomarkers, TumorCDK4 protein, humanCDK6 protein, humanCyclin-Dependent Kinase 4Cyclin-Dependent Kinase 6RB1 protein, humanRetinoblastoma Binding ProteinsUbiquitin-Protein Ligases

Identifiers

PMID32242058
PMCPMC7118159
OpenAlexW3014460252

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.