Evidence map›Paper›PMID 32240715›Full record

ArticleJournal of hepatology2020

Antibody avidity-based approach to estimate population-level incidence of hepatitis C.

Denali Boon, Veronica Bruce, Eshan U Patel, Jeffrey Quinn, Aylur K Srikrishnan, Saravanan Shanmugam, Syed Iqbal, Pachamuthu Balakrishnan, Matthew Sievers, Gregory D Kirk and 7 more

Open access · greenAbstract read
In one paragraph

Article in Journal of hepatology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.4field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Biomarkers in Detection of Hepatitis C Virus Infection.Pathogens (Basel, Switzerland) · 2024
    Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

Denali BoonJohns Hopkins University, Baltimore, Maryland, USA. Electronic address: denali@jhu.edu.
Veronica BruceUniversity of New Mexico, Albuquerque, New Mexico, USA.
Eshan U PatelJohns Hopkins University, Baltimore, Maryland, USA.
Jeffrey QuinnJohns Hopkins University, Baltimore, Maryland, USA.
Aylur K SrikrishnanYR Gaitonde Centre for AIDS Research and Education, Chennai, India.
Saravanan ShanmugamYR Gaitonde Centre for AIDS Research and Education, Chennai, India.
Syed IqbalYR Gaitonde Centre for AIDS Research and Education, Chennai, India.
Pachamuthu BalakrishnanYR Gaitonde Centre for AIDS Research and Education, Chennai, India.
Matthew SieversJohns Hopkins University, Baltimore, Maryland, USA.
Gregory D KirkJohns Hopkins University, Baltimore, Maryland, USA.
David L ThomasJohns Hopkins University, Baltimore, Maryland, USA.
Thomas C QuinnJohns Hopkins University, Baltimore, Maryland, USA; National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland, USA.
Andrea L CoxJohns Hopkins University, Baltimore, Maryland, USA.
Kimberly A PageUniversity of New Mexico, Albuquerque, New Mexico, USA.
Sunil S SolomonJohns Hopkins University, Baltimore, Maryland, USA; YR Gaitonde Centre for AIDS Research and Education, Chennai, India.
Shruti H MehtaJohns Hopkins University, Baltimore, Maryland, USA.
Oliver LaeyendeckerJohns Hopkins University, Baltimore, Maryland, USA; National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland, USA.
Johns Hopkins University · USYR Gaitonde Centre for AIDS Research and Education · INUniversity of New Mexico · USNational Institute of Allergy and Infectious Diseases · USNational Institutes of Health · US

Funding

LC: HIV Prevention Trials Network - Laboratory Support for the SARS-CoV-2 Seroprevalence Study (CoVPN 5002)UM1AI068613 · NIAID · JOHNS HOPKINS UNIVERSITY · PI SUSAN H ESHLEMAN, Mark A Marzinke · 2011 to 2026
$100.2M
Vaccine Response and Immunotherapeutics SWGP30AI094189 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Richard E. Chaisson · 2012 to 2026
$67.0M
The AIDS Linked to the Intravenous Experience (ALIVE) StudyU01DA036297 · NIDA · JOHNS HOPKINS UNIVERSITY · PI Gregory D Kirk, Shruti H Mehta · 2014 to 2026
$28.9M
NIDA Epidemiology Training Program: Johns Hopkins UniversityT32DA007292 · NIDA · JOHNS HOPKINS UNIVERSITY · PI RENEE M. JOHNSON, Brion S Maher · 1993 to 2026
$17.7M
International Studies of the Acquired Immune Deficiency Syndrome (AIDS)ZIAAI000361 · NIAID · NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES · PI REDD, ANDREW · 2009 to 2025
$15.8M
INCIDENCE OF HIV INFECTIONS IN A COHORT OF IV DRUG USERSR01DA012568 · NIDA · JOHNS HOPKINS UNIVERSITY · PI MEHTA, SHRUTI H · 1999 to 2017
$15.5M
Acute Hepatitis C Infection in Young InjectorsR01DA016017 · NIDA · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI PAGE, KIMBERLY · 2002 to 2018
$14.0M
The Impact of HCV Treatment in HIV/HCV coinfected and HCV monoinfected Incarcerated Persons on HCV EliminationR01DA013806 · NIDA · JOHNS HOPKINS UNIVERSITY · PI IRVIN, RISHA, THOMAS, DAVID L · 2000 to 2024
$8.7M
Scientific CoreU19AI088791 · NIAID · JOHNS HOPKINS UNIVERSITY · PI COX, ANDREA L · 2010 to 2020
$8.2M
HIV HCV Coinfection Antiviral Therapy and FibrosisR37DA013806 · NIDA · JOHNS HOPKINS UNIVERSITY · PI THOMAS, DAVID L · 2010 to 2019
$7.0M
Laboratory and Statistical Development of Cross-Sectional HIV Incidence AssaysR01AI095068 · NIAID · JOHNS HOPKINS UNIVERSITY · PI ESHLEMAN, SUSAN H · 2011 to 2021
$6.6M
Johns Hopkins HIV Epidemiology and Prevention Sciences Training ProgramT32AI102623 · NIAID · JOHNS HOPKINS UNIVERSITY · PI Shruti H Mehta · 2013 to 2026
$5.3M
NIAID NIH HHS K24 AI118591NIAID NIH HHS P30 AI094189NIAID NIH HHS R01 AI077757NIAID NIH HHS R01 AI095068NIAID NIH HHS R01 AI108403NIAID NIH HHS T32 AI102623NIAID NIH HHS U19 AI088791NIAID NIH HHS UM1 AI068613NIDA NIH HHS R01 DA012568NIDA NIH HHS R01 DA013806NIDA NIH HHS R01 DA016017NIDA NIH HHS R01 DA026727NIDA NIH HHS R01 DA057552NIDA NIH HHS R37 DA013806NIDA NIH HHS T32 DA007292NIDA NIH HHS U01 DA036297
6 · The paper itself

Abstract

BACKGROUND &

aimsAccurate HCV incidence estimates are critical for monitoring progress towards HCV elimination goals, including an 80% reduction in HCV incidence by 2030. Moreover, incidence estimates can help guide prevention and treatment programming, particularly in the context of the US opioid epidemic.

methodsAn inexpensive, Genedia-based HCV IgG antibody avidity assay was evaluated as a platform to estimate cross-sectional, population-level primary HCV incidence using 1,840 HCV antibody and RNA-positive samples from 875 individuals enrolled in 5 cohort studies in the US and India. Using samples collected <2 years following HCV seroconversion, the mean duration of recent infection (MDRI) was calculated by fitting a maximum likelihood binomial regression model to the probability of appearing recent. Among samples collected ≥2 years post-HCV seroconversion, an individual-level false recent ratio (FRR) was calculated by estimating the probability of appearing recent using an exact binomial test. Factors associated with falsely appearing recent among samples collected ≥2 years post seroconversion were determined by Poisson regression with generalized estimating equations and robust variance estimators.

resultsAn avidity index cut-off of <40% resulted in an MDRI of 113 days (95% CI 84-146), and FRRs of 0.4% (95% CI 0.0-1.2), 4.6% (95% CI 2.2-8.3), and 9.5% (95% CI 3.6-19.6) among individuals who were HIV-uninfected, HIV-infected, and HIV-infected with a CD4 count <200/μl, respectively. No variation was seen between HCV genotypes 1 and 3. In hypothetical scenarios of high-risk settings, a sample size of <1,000 individuals could reliably estimate primary HCV incidence.

conclusionsThis cross-sectional approach can estimate primary HCV incidence for the most common genotypes. This tool can serve as a valuable resource for program and policy planners seeking to monitor and reduce HCV burden. LAY SUMMARY: Determining the rate of new hepatitis C virus (HCV) infections in a population is critical to monitoring progress toward HCV elimination and to appropriately guide control efforts. However, since HCV infections are most often initially asymptomatic, it is difficult to estimate the rate of new HCV infections without following HCV-uninfected people over time and repeatedly testing them for HCV infection. Here, we present a novel, resource-efficient method to estimate the rate of new HCV infections in a population using data from a single timepoint.

Indexed as

HepacivirusHepatitis CHIV InfectionsAntibody AffinityCD4 Lymphocyte CountCohort StudiesEpidemiological MonitoringHepatitis C AntibodiesHumansImmunoglobulin GIncidenceIndiaSeroconversionSerologic TestsUnited StatesViral LoadHepatitis C AntibodiesImmunoglobulin GHCVHIV/HCV coinfectionIncidenceRecent infectionSurveillance

Identifiers

PMID32240715
PMCPMC7458132
OpenAlexW3014803092

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.