Evidence map›Paper›PMID 32239503›Full record

ReviewFEBS letters2020

Understanding oncogenicity of cancer driver genes and mutations in the cancer genomics era.

Eduard Porta-Pardo, Alfonso Valencia, Adam Godzik

Open access · hybridAbstract readReview
In one paragraph

Review in FEBS letters, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 54 citations in OpenAlex.

  1. The Mutational Landscape of Acute Myeloid Leukemia and Its Impact.International journal of molecular sciences · 2026
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  7. Development of a prognostic model based on m6A readerTranslational cancer research · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Eduard Porta-PardoBarcelona Supercomputing Center (BSC), Barcelona, Spain.
Alfonso ValenciaBarcelona Supercomputing Center (BSC), Barcelona, Spain.
Adam GodzikDivision of Biomedical Sciences, University of California Riverside School of Medicine, Riverside, CA, USA.ORCID 0000-0002-2425-852X
Barcelona Supercomputing Center · ESInstitució Catalana de Recerca i Estudis Avançats · ESUniversity of California, Riverside · US

Funding

Understanding structural flexibility and evolutionary divergence of proteinsR35GM118187 · NIGMS · UNIVERSITY OF CALIFORNIA RIVERSIDE · PI GODZIK, ADAM · 2016 to 2020
$1.9M
NIGMS NIH HHS R35 GM118187
6 · The paper itself

Abstract

One of the key challenges of cancer biology is to catalogue and understand the somatic genomic alterations leading to cancer. Although alternative definitions and search methods have been developed to identify cancer driver genes and mutations, analyses of thousands of cancer genomes return a remarkably similar catalogue of around 300 genes that are mutated in at least one cancer type. Yet, many features of these genes and their role in cancer remain unclear, first and foremost when a somatic mutation is truly oncogenic. In this review, we first summarize some of the recent efforts in completing the catalogue of cancer driver genes. Then, we give an overview of different aspects that influence the oncogenicity of somatic mutations in the core cancer driver genes, including their interactions with the germline genome, other cancer driver mutations, the immune system, or their potential role in healthy tissues. In the coming years, this research holds promise to illuminate how, when, and why cancer driver genes and mutations are really drivers, and thereby move personalized cancer medicine and targeted therapies forward.

Indexed as

GenomicsMutationCarcinogenesisHumansNeoplasmsOncogenescancer driverscancer genesmultiscale analysispersonalized medicinevariants of unknown significance

Identifiers

PMID32239503
PMCPMC7529711
OpenAlexW3014963373

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.