ArticleFEMS microbiology ecology2020
Insights into the community structure and lifestyle of the fungal root endophytes of tomato by combining amplicon sequencing and isolation approaches with phytohormone profiling.
Article in FEMS microbiology ecology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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Who cites it
21 citing papers in PubMed, 59 citations in OpenAlex.
- Unlocking the microbiome of an extremophile plant: metagenomic insights into Calotropis procera's endo-rhizosphere communities.World journal of microbiology & biotechnology · 2026Article
- Temporal dynamics of the tomato rhizosphere microbiome in response to synthetic communities of plant growth-promoting rhizobacteria.Scientific reports · 2026Article
- Article
- Plant Genetic Bases Associated With Microbiota Descriptors Shed Light Into a Novel Holobiont Generalist Genes Theory.Environmental microbiology · 2025Article
- Chaetomium, Chlonostachys, and Pseudogymnoascus isolates from tomato tissues significantly suppress Phytophthora infestans in tomato.PloS one · 2025Article
- Discovering fungal communities in roots ofIMA fungus · 2025Article
- Microbial Biocontrol Agents and Natural Products Act as Salt Stress Mitigators inPlants (Basel, Switzerland) · 2024Article
- Molecular identification and pathogenicity of endophytic fungi from corn ears.Scientific reports · 2024Article
- Investigation of the Microbial Diversity in theJournal of fungi (Basel, Switzerland) · 2024Article
- Exploring the impact of plant genotype and fungicide treatment on endophytic communities in tomato stems.Frontiers in microbiology · 2024Article
- Microbial dysbiosis in roots and rhizosphere of grapevines experiencing decline is associated with active metabolic functions.Frontiers in plant science · 2024Article
- Comparative analysis of endophyte diversity ofPlant biotechnology (Tokyo, Japan) · 2023Article
- Endophytic fungi related to the ash dieback causal agent encode signatures of pathogenicity on European ash.IMA fungus · 2023Article
- Constellation of the endophytic mycobiome in spring and winter wheat cultivars grown under various conditions.Scientific reports · 2023Article
- Article
- Soil and Soilless Tomato Cultivation Promote Different Microbial Communities That Provide New Models for Future Crop Interventions.International journal of molecular sciences · 2022Article
- Bacterial-fungal interactions under agricultural settings: from physical to chemical interactions.Stress biology · 2022Review
- Post-translational regulation of autophagy is involved in intra-microbiome suppression of fungal pathogens.Microbiome · 2021Article
- Exploration of Intrinsic Microbial Community Modulators in the Rice Endosphere Indicates a Key Role of Distinct Bacterial Taxa Across Different Cultivars.Frontiers in microbiology · 2021Article
- Microbiome Modulation-Toward a Better Understanding of Plant Microbiome Response to Microbial Inoculants.Frontiers in microbiology · 2021Review
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Authors and funding
8 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Little is known about the influence of host genotype and phytohormones on the composition of fungal endophytic communities. We investigated the influence of host genotype and phytohormones on the structure of the fungal endophytic communities of tomato roots by amplicon sequencing of the ITS1 region and combined this approach with isolation and functional characterization of the isolates. A significant effect of the host genotype on the dominant fungal species was found by comparing the cultivars Castlemart and UC82B and, surprisingly, root pathogens were among the most abundant taxa. In contrast, smaller changes in the relative abundance of the dominant species were found in mutants impaired in jasmonic acid biosynthesis (def1) and ethylene biosynthesis (8338) compared to the respective wild types. However, def1 showed significantly higher species richness compared to the wild type. Analysis of the phytohormone profiles of these genotypes indicates that changes in the phytohormone balance may contribute to this difference in species richness. Assessing the lifestyle of isolated fungi on tomato seedlings revealed the presence of both beneficial endophytes and latent pathogens in roots of asymptomatic plants, suggesting that the interactions between members of the microbiome maintain the equilibrium in the community preventing pathogens from causing disease.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.