Evidence map›Paper›PMID 32238403›Full record

ArticleCold Spring Harbor molecular case studies2020

Defining an embryonal rhabdomyosarcoma endotype.

Cora A Ricker, Kenneth Crawford, Kevin Matlock, Melvin Lathara, Bernard Seguin, Erin R Rudzinski, Noah E Berlow, Charles Keller

Open access · diamondAbstract readCase Reports
In one paragraph

Article in Cold Spring Harbor molecular case studies, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Translational precision medicine: an industry perspective.Journal of translational medicine · 2021
    Review
  5. Article
  6. Refractory alveolar rhabdomyosarcoma in an 11-year-old male.Cold Spring Harbor molecular case studies · 2021
    Article
  7. Genetics of congenital solid tumors.Romanian journal of morphology and embryology = Revue roumaine de morphologie et embryologie
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Cora A RickerChildren's Cancer Therapy Development Institute, Beaverton, Oregon 97005, USA.
Kenneth CrawfordChildren's Cancer Therapy Development Institute, Beaverton, Oregon 97005, USA.
Kevin MatlockOmics Data Automation, Beaverton, Oregon 97221, USA.
Melvin LatharaOmics Data Automation, Beaverton, Oregon 97221, USA.
Bernard SeguinFlint Animal Cancer Center, Colorado State University, Fort Collins, Colorado 80525, USA.
Erin R RudzinskiSeattle Children's Hospital, Seattle, Washington 98105, USA.
Noah E BerlowChildren's Cancer Therapy Development Institute, Beaverton, Oregon 97005, USA.
Charles KellerChildren's Cancer Therapy Development Institute, Beaverton, Oregon 97005, USA.ORCID 0000-0003-2505-7487
Children's Cancer Therapy Development Institute · USAutomatic Data Processing (United States) · USColorado State University · USSeattle Children's Hospital · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rhabdomyosarcoma (RMS) is the most common childhood soft-tissue sarcoma. The largest subtype of RMS is embryonal rhabdomyosarcoma (ERMS) and accounts for 53% of all RMS. ERMS typically occurs in the head and neck region, bladder, or reproductive organs and portends a promising prognosis when localized; however, when metastatic the 5-yr overall survival rate is ∼43%. The genomic landscape of ERMS demonstrates a range of putative driver mutations, and thus the recognition of the pathological mechanisms driving tumor maintenance should be critical for identifying effective targeted treatments at the level of the individual patients. Here, we report genomic, phenotypic, and bioinformatic analyses for a case of a 3-yr-old male who presented with bladder ERMS. Additionally, we use an unsupervised agglomerative clustering analysis of RNA and whole-exome sequencing data across ERMS and undifferentiated pleomorphic sarcoma (UPS) tumor samples to determine several major endotypes inferring potential targeted treatments for a spectrum of pediatric ERMS patient cases.

Indexed as

Genetic Association StudiesGenetic Predisposition to DiseaseAntineoplastic AgentsBiomarkers, TumorBiopsyCell Line, TumorCell SurvivalComputational BiologyExome SequencingGenetic TestingGenomicsHumansImmunohistochemistryInfantMagnetic Resonance ImagingMaleAntineoplastic AgentsBiomarkers, Tumorembryonal rhabdomyosarcoma

Identifiers

PMID32238403
PMCPMC7133750
OpenAlexW3014773339

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.