Evidence map›Paper›PMID 32236829›Full record

ArticleBreast cancer research and treatment2020

Obesity-associated methylation in breast tumors: a possible link to disparate outcomes?

Whitney L Do, Karen Conneely, Sheryl Gabram-Mendola, Uma Krishnamurti, Olivia D'Angelo, Jasmine Miller-Kleinhenz, Keerthi Gogineni, Mylin Torres, Lauren E McCullough

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Article in Breast cancer research and treatment, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Whitney L DoDepartment of Global Health, Emory University Rollins School of Public Health, Atlanta, GA, 30322, USA. rleet@emory.edu.ORCID http://orcid.org/0000-0001-8977-9951
Karen ConneelyDepartment of Human Genetics, Emory University School of Medicine, Atlanta, GA, 30322, USA.
Sheryl Gabram-MendolaDepartment of Surgery, Emory University School of Medicine, Atlanta, GA, 30322, USA.
Uma KrishnamurtiDepartment of Pathology and Laboratory Medicine, Emory University School of Medicine, Atlanta, GA, 30322, USA.
Olivia D'AngeloDepartment of Surgery, Jackson Memorial Hospital/University of Miami Miller School of Medicine, Miami, FL, 33136, USA.
Jasmine Miller-KleinhenzDepartment of Epidemiology, Emory University Rollins School of Public Health, Atlanta, GA, 30322, USA.
Keerthi GogineniDepartment of Hematology and Medical Oncology, Emory University School of Medicine, Atlanta, GA, 30322, USA.
Mylin TorresDepartment of Radiation Oncology, Emory University School of Medicine, Atlanta, GA, 30322, USA.
Lauren E McCulloughDepartment of Epidemiology, Emory University Rollins School of Public Health, Atlanta, GA, 30322, USA.
Emory University · USUniversity of Miami · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeAs a primary risk factor and modifier of breast cancer incidence and prognosis, obesity may contribute to race disparities in breast cancer outcomes. This study examined association between obesity and DNA methylation in non-Hispanic Black and White women diagnosed with breast cancer.

methodsGenome-wide DNA methylation was measured in the breast cancer tumor tissue of 96 women using the EPIC array. To examine the association between obesity and tumor methylation, linear regression models were used-regressing methylation β value for each cytosine and guanine (CpG) site on body mass index adjusting for covariates. Significance was set at false discovery rate (FDR) < 0.05. In the top 20 CpG sites, we explored the interactions with race and estrogen receptor (ER) status. We used multivariable Cox-proportional hazard models to examine whether methylation in the top 20 sites was associated with all-cause mortality.

resultsWhile none of the CpG sites passed the FDR threshold for significance, among the top 20 CpG sites, we observed interactions with race (TOMM20) and ER status (PSMB1, QSOX1 and PHF1). The same CpG sites in TOMM20, PSMB1, and QSOX1 were associated with all-cause mortality.

conclusionsWe identified novel interactions between obesity-associated methylation and both race and ER status in genes that have been associated with tumor regulation. Our data suggest that dysregulation in two sites may associate with all-cause mortality.

Indexed as

Body Mass IndexDNA MethylationBlack or African AmericanBreast NeoplasmsCpG IslandsEpigenesis, GeneticErb-b2 Receptor Tyrosine KinasesFemaleFollow-Up StudiesHumansMiddle AgedObesityPrognosisReceptors, EstrogenReceptors, ProgesteroneSurvival RateERBB2 protein, humanErb-b2 Receptor Tyrosine KinasesReceptors, EstrogenReceptors, ProgesteroneBreast cancerDisparityEpigeneticsMortalityObesity

Identifiers

PMID32236829
OpenAlexW3014717214

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.