Evidence map›Paper›PMID 32234760›Full record

ArticleClinical cancer research : an official journal of the American Association for Cancer Research2020

A CpG Methylation Classifier to Predict Relapse in Adults with T-Cell Lymphoblastic Lymphoma.

Xiao-Peng Tian, Ning Su, Liang Wang, Wei-Juan Huang, Yan-Hui Liu, Xi Zhang, Hui-Qiang Huang, Tong-Yu Lin, Shu-Yun Ma, Hui-Lan Rao and 44 more

Abstract readValidation Study
PubMed Publisher
In one paragraph

Article in Clinical cancer research : an official journal of the American Association for Cancer Research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 40 citations in OpenAlex.

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  11. Lymphoblastic Lymphoma: a Concise Review.Current oncology reports · 2022
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

54 authors at 20 institutions in 1 country.

Xiao-Peng Tian *State Key Laboratory of Oncology in South China, Collaborative Innovation Center of Cancer Medicine, Sun Yat-sen University Cancer Center, Guangzhou, P.R. China.
Ning Su *Department of Medical Oncology, Sun Yat-sen University Cancer Center, Guangzhou, P.R. China.
Liang Wang *Department of Hematology, Beijing Tongren Hospital, Capital Medical University, Beijing, P.R. China.
Wei-Juan Huang *Department of Pharmacology, College of Pharmacy, Jinan University, Guangzhou, P.R. China.
Yan-Hui LiuDepartment of Pathology, Guangdong General Hospital, Guangdong Academy of Medical Sciences, Guangzhou, P.R. China.
Xi ZhangDepartment of Hematology, Xinqiao Hospital, Third Military Medical University, Chongqing, P.R. China.
Hui-Qiang HuangDepartment of Medical Oncology, Sun Yat-sen University Cancer Center, Guangzhou, P.R. China.
Tong-Yu LinDepartment of Medical Oncology, Sun Yat-sen University Cancer Center, Guangzhou, P.R. China.
Shu-Yun MaState Key Laboratory of Oncology in South China, Collaborative Innovation Center of Cancer Medicine, Sun Yat-sen University Cancer Center, Guangzhou, P.R. China.
Hui-Lan RaoDepartment of Pathology, Sun Yat-sen University Cancer Center, Guangzhou, P.R. China.
Mei LiDepartment of Pathology, Sun Yat-sen University Cancer Center, Guangzhou, P.R. China.
Fang LiuDepartment of Pathology, The First People's Hospital of Foshan, Foshan, P.R. China.
Fen ZhangDepartment of Pathology, Guangdong General Hospital, Guangdong Academy of Medical Sciences, Guangzhou, P.R. China.
Li-Ye ZhongDepartment of Hematology, Guangdong General Hospital, Guangdong Academy of Medical Sciences, Guangzhou, P.R. China.
Li LiangDepartment of Pathology, Nanfang Hospital, Southern Medical University, Guangzhou, P.R. China.
Xiao-Liang LanDepartment of General Surgery, Nanfang Hospital, Southern Medical University, Guangzhou, P.R. China.
Juan LiDepartment of Hematology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, P.R. China.
Bing LiaoDepartment of Pathology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, P.R. China.
Zhi-Hua LiDepartment of Oncology, Sun-Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, P.R. China.
Qiong-Lan TangDepartment of Oncology, Sun-Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou, P.R. China.
Qiong LiangDepartment of Pathology, The Third Affiliated Hospital, Sun Yat-sen University, Guangzhou, P.R. China.
Chun-Kui ShaoDepartment of Pathology, The Third Affiliated Hospital, Sun Yat-sen University, Guangzhou, P.R. China.
Qiong-Li ZhaiDepartment of Pathology, Tianjin Medical University Cancer Institute and Hospital, Tianjin, P.R. China.
Run-Fen ChengDepartment of Pathology, Tianjin Medical University Cancer Institute and Hospital, Tianjin, P.R. China.
Qi SunDepartment of Pathology, Hematological Hospital of Chinese Academy of Medical Sciences, Tianjin, P.R. China.
Kun RuDepartment of Pathology, Tianjin Medical University Cancer Institute and Hospital, Tianjin, P.R. China.
Xia GuDepartment of Pathology, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, P.R. China.
Xi-Na LinDepartment of Pathology, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, P.R. China.
Kun YiDepartment of Oncology, Jiangxi Provincial Cancer Hospital, Nanchang, P.R. China.
Yue-Rong ShuangDepartment of Hematology, Jiangxi Provincial Cancer Hospital, Nanchang, P.R. China.
Xiao-Dong ChenDepartment of Pathology, General Hospital of Guangzhou Military Command of PLA, Guangzhou, P.R. China.
Wei DongDepartment of Hematology, Shunde Hospital of Southern Medical University, Shunde, P.R. China.
Cai SunDepartment of Pathology, The First Affiliated Hospital of Xuzhou Medical University, Xuzhou, P.R. China.
Wei SangDepartment of Hematology, The First Affiliated Hospital of Xuzhou Medical University, Xuzhou, P.R. China.
Hui LiuDepartment of Pathology, The First Affiliated Hospital of Xuzhou Medical University, Xuzhou, P.R. China.
Zhi-Gang ZhuDepartment of Hematology and Oncology, Guangzhou First People's Hospital, Guangzhou, P.R. China.
Jun RaoDepartment of Hematology, Xinqiao Hospital, Third Military Medical University, Chongqing, P.R. China.
Qiao-Nan GuoDepartment of Pathology, Xinqiao Hospital, Third Military Medical University, Chongqing, P.R. China.
Ying ZhouDepartment of Medical Oncology, Jiangmen Central Hospital, Jiangmen, P.R. China.
Xiang-Ling MengDepartment of General Surgery, The First Affiliated Hospital of Anhui Medical University, Hefei, P.R. China.
Yong ZhuDepartment of Gastrointestinal Surgery, The Fourth Affiliated Hospital of Anhui Medical University, Hefei, P.R. China.
Chang-Lu HuDepartment of Medical? Oncology, Anhui Provincial Cancer Hospital, Hefei, P.R. China.
Yi-Rong JiangDepartment of Hematology, The First People's Hospital of Dongguan, Dongguan, P.R. China.
Ying ZhangDepartment of Oncology, Affiliated Hospital of Guangdong Medical University, Guangzhou, P.R. China.
Hong-Yi GaoDepartment of Pathology, Guangdong Province Hospital for Women and Children Health Care, Guangzhou, P.R. China.
Wen-Jun HeDepartment of Medical Statistics and Epidemiology, School of Public Health, Sun Yat-sen University, Guangzhou, P.R. China.
Zhong-Jun XiaDepartment of Hematology, Sun Yat-sen University Cancer Center, Guangzhou, P.R. China.
Xue-Yi PanDepartment of Hematology, The First Affiliated Hospital of Guangdong Pharmaceutical University, Guangzhou, P.R. China.
Lan HaiDepartment of Hematology, Shunde Affiliated Hospital of Guangzhou University of Chinese Medicine, Foshan, P.R. China.
Guo-Wei LiDepartment of Hematology, Huizhou Municipal Central Hospital, Huizhou, P.R. China.
Li-Yan SongDepartment of Pharmacology, College of Pharmacy, Jinan University, Guangzhou, P.R. China.
Tie-Bang KangState Key Laboratory of Oncology in South China, Collaborative Innovation Center of Cancer Medicine, Sun Yat-sen University Cancer Center, Guangzhou, P.R. China.ORCID 0000-0001-8805-4174
Dan Xie *State Key Laboratory of Oncology in South China, Collaborative Innovation Center of Cancer Medicine, Sun Yat-sen University Cancer Center, Guangzhou, P.R. China.
Qing-Qing Cai *State Key Laboratory of Oncology in South China, Collaborative Innovation Center of Cancer Medicine, Sun Yat-sen University Cancer Center, Guangzhou, P.R. China. caiqq@sysucc.org.cn.
Sun Yat-sen University · CNArmy Medical University · CNGuangdong General Hospital · CNTianjin Medical University Cancer Institute and Hospital · CNXuzhou Medical College · CNAnhui Medical University · CNFirst Affiliated Hospital of Guangzhou Medical University · CNJiangxi Provincial Cancer Hospital · CNJinan University · CNSouthern Medical University · CNAnhui Provincial Hospital · CNBeijing Tongren Hospital · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNDongguan People’s Hospital · CNFirst Affiliated Hospital of Guangdong Pharmaceutical University · CNFirst People's Hospital of Foshan · CNGeneral Hospital of Guangzhou Military Command · CNGuangdong Province Women and Children Hospital · CNGuangzhou First People's Hospital · CNGuangzhou University of Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeAdults with T-cell lymphoblastic lymphoma (T-LBL) generally benefit from treatment with acute lymphoblastic leukemia (ALL)-like regimens, but approximately 40% will relapse after such treatment. We evaluated the value of CpG methylation in predicting relapse for adults with T-LBL treated with ALL-like regimens. EXPERIMENTAL

designA total of 549 adults with T-LBL from 27 medical centers were included in the analysis. Using the Illumina Methylation 850K Beadchip, 44 relapse-related CpGs were identified from 49 T-LBL samples by two algorithms: least absolute shrinkage and selector operation (LASSO) and support vector machine-recursive feature elimination (SVM-RFE). We built a four-CpG classifier using LASSO Cox regression based on association between the methylation level of CpGs and relapse-free survival in the training cohort (

resultsThe four-CpG-based classifier discriminated patients with T-LBL at high risk of relapse in the training cohort from those at low risk (

conclusionsOur four-CpG-based classifier could predict disease relapse in patients with T-LBL, and could be used to guide treatment decision.

Indexed as

DNA MethylationNomogramsAdultAntineoplastic Combined Chemotherapy ProtocolsClinical Decision-MakingCpG IslandsDisease-Free SurvivalF-Box-WD Repeat-Containing Protein 7FemaleFollow-Up StudiesHematopoietic Stem Cell TransplantationHumansMaleMiddle AgedNeoplasm Recurrence, LocalPatient SelectionF-Box-WD Repeat-Containing Protein 7FBXW7 protein, humanNOTCH1 protein, humanReceptor, Notch1

Identifiers

PMID32234760
OpenAlexW3014506572

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.