ArticleMicrobiome2020
Genomic and transcriptomic evidence of light-sensing, porphyrin biosynthesis, Calvin-Benson-Bassham cycle, and urea production in Bathyarchaeota.
Article in Microbiome, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers, 1 of them a synthesis that pooled it.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
24 citing papers in PubMed, 1 synthesis or guideline pooled it, 53 citations in OpenAlex.
- Pooled it
- Effect of leguminous green manures on alleviating continuous cropping obstacles in muskmelon cultivation.Scientific reports · 2025Article
- Carbon metabolic versatility underpins Bathyarchaeia ecological significance across the global deep subsurface.The ISME journal · 2025Review
- Insights from metagenomics on microbial biosynthesis of vitamins B and KFrontiers in veterinary science · 2025Article
- Cultivation of Diverse Novel Marine Bacteria from Deep Ocean Sediment Using Spent Culture Supernatant of Ca. Bathyarchaeia Enrichment.Journal of microbiology (Seoul, Korea) · 2024Article
- Metagenomic insights into Heimdallarchaeia clades from the deep-sea cold seep and hydrothermal vent.Environmental microbiome · 2024Article
- Niche differentiation and biogeography of Bathyarchaeia in paddy soil ecosystems: a case study in eastern China.Environmental microbiome · 2024Article
- Diversity ofISME communications · 2024Article
- Long-read assembled metagenomic approaches improve our understanding on metabolic potentials of microbial community in mangrove sediments.Microbiome · 2023Article
- Linking Groundwater to Surface Discharge Ecosystems: Archaeal, Bacterial, and Eukaryotic Community Diversity and Structure in Quebec (Canada).Microorganisms · 2023Article
- Diverse Bathyarchaeotal Lineages Dominate Archaeal Communities in the Acidic Dajiuhu Peatland, Central China.Microbial ecology · 2023Article
- Community-integrated multi-omics facilitates screening and isolation of the organohalide dehalogenation microorganism.Innovation (Cambridge (Mass.)) · 2023Article
- Distinct Features of Sedimentary Archaeal Communities in Hypoxia and Non-Hypoxia Regions off the Changjiang River Estuary.Microbiology spectrum · 2022Article
- Enhanced cobalamin biosynthesis inSynthetic and systems biotechnology · 2022Article
- Genomic and transcriptomic dissection of Theionarchaea in marine ecosystem.Science China. Life sciences · 2022Article
- Expanding Asgard members in the domain of Archaea sheds new light on the origin of eukaryotes.Science China. Life sciences · 2022Article
- Biosynthesis of Tetrapyrrole Cofactors by Bacterial Community Inhabiting Porphyrine-Containing Shale Rock (Fore-Sudetic Monocline).Molecules (Basel, Switzerland) · 2021Article
- Biogeography, Assembly Patterns, Driving Factors, and Interactions of Archaeal Community in Mangrove Sediments.mSystems · 2021Article
- Diversity, metabolism and cultivation of archaea in mangrove ecosystems.Marine life science & technology · 2021Review
- Article
Corrections and comments
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Authors and funding
8 authors at 3 institutions in 3 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundBathyarchaeota, a newly proposed archaeal phylum, is considered as an important driver of the global carbon cycle. However, due to the great diversity of them, there is limited genomic information that accurately encompasses the metabolic potential of the entire archaeal phylum.
resultsIn the current study, nine metagenome-assembled genomes of Bathyarchaeota from four subgroups were constructed from mangrove sediments, and metatranscriptomes were obtained for evaluating their in situ transcriptional activities. Comparative analyses with reference genomes and the transcripts of functional genes posit an expanded role for Bathyarchaeota in phototrophy, autotrophy, and nitrogen and sulfur cycles, respectively. Notably, the presence of genes for rhodopsins, cobalamin biosynthesis, and the oxygen-dependent metabolic pathways in some Bathyarchaeota subgroup 6 genomes suggest a light-sensing and microoxic lifestyle within this subgroup.
conclusionsThe results of this study expand our knowledge of metabolic abilities and diverse lifestyles of Bathyarchaeota, highlighting the crucial role of Bathyarchaeota in geochemical cycle. Video abstract.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.