Evidence map›Paper›PMID 32234060›Full record

ArticleVirology journal2020

Investigation of the immunogenicity of Zika glycan loop.

Elizabeth A Henderson, Christina C Tam, Luisa W Cheng, Annie Elong Ngono, Anh-Viet Nguyen, Sujan Shresta, Matt McGee, Hal Padgett, Laurence K Grill, Mikhail Martchenko Shilman

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Linear and Continuous Flavivirus Epitopes From Naturally Infected Humans.Frontiers in cellular and infection microbiology · 2021
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Elizabeth A HendersonHenry E. Riggs School of Applied Life Sciences, Keck Graduate Institute, Claremont, CA, 91711, USA.
Christina C TamFoodborne Toxin Detection and Prevention Research Unit, Western Regional Research Center, United States Department of Agriculture (USDA), Albany, CA, 94710, USA.
Luisa W ChengFoodborne Toxin Detection and Prevention Research Unit, Western Regional Research Center, United States Department of Agriculture (USDA), Albany, CA, 94710, USA.
Annie Elong NgonoDivision of Inflammation Biology, La Jolla Institute for Allergy and Immunology, La Jolla, CA, 92037, USA.
Anh-Viet NguyenDivision of Inflammation Biology, La Jolla Institute for Allergy and Immunology, La Jolla, CA, 92037, USA.
Sujan ShrestaDivision of Inflammation Biology, La Jolla Institute for Allergy and Immunology, La Jolla, CA, 92037, USA.
Matt McGeeNovici Biotech LLC, Vacaville, CA, 95688, USA.
Hal PadgettNovici Biotech LLC, Vacaville, CA, 95688, USA.
Laurence K GrillHenry E. Riggs School of Applied Life Sciences, Keck Graduate Institute, Claremont, CA, 91711, USA. larry_grill@kgi.edu.
Mikhail Martchenko ShilmanHenry E. Riggs School of Applied Life Sciences, Keck Graduate Institute, Claremont, CA, 91711, USA. mikhail_shilman@kgi.edu.
Keck Graduate Institute · USLa Jolla Institute for Immunology · USNovici Biotech (United States) · USUnited States Department of Agriculture · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundZika virus (ZIKV) is a major human pathogen and member of the Flavivirus genus. Previous studies have identified neutralizing antibodies from Zika patients that bind to quaternary epitopes across neighboring envelope (E) proteins, called E dimer epitopes (EDE). An asparagine-linked glycan on the "glycan loop" (GL) of the ZIKV envelope protein protects the functionally important "fusion loop" on the opposite E subunit in the dimer, and EDE antibodies have been shown to bind to both of these loops. Human EDE antibodies have been divided into two subclasses based on how they bind to the glycan loop region: EDE1 antibodies do not require glycosylation for binding, while EDE2 antibodies strongly rely on the glycan for binding.

methodsZIKV GL was expressed on tobacco mosaic virus nanoparticles. Mice were immunized with GL or full-length monomeric E and the immune response was analyzed by testing the ability of sera and monoclonal antibodies to bind to GL and to neutralize ZIKV in in vitro cellular assay.

resultsWe report here the existence of ZIKV moderately neutralizing antibodies that bind to E monomers through epitopes that include the glycan loop. We show that sera from human Zika patients contain antibodies capable of binding to the unglycosylated glycan loop in the absence of the rest of the envelope protein. Furthermore, mice were inoculated with recombinant E monomers and produced neutralizing antibodies that either recognize unglycosylated glycan loop or require glycan for their binding to monomeric E. We demonstrate that both types of antibodies neutralize ZIKV to some extent in a cellular virus neutralization assay.

conclusionsAnalogous to the existing EDE antibody nomenclature, we propose a new classification for antibodies that bind to E monomer epitopes (EME): EME1 and EME2 for those that do not require and those that do require glycan for binding to E, respectively.

Indexed as

AnimalsAntibodies, MonoclonalAntibodies, NeutralizingAntibodies, ViralBinding Sites, AntibodyEpitopesFemaleGlycosylationHumansImmunogenicity, VaccineMiceMice, Inbred BALB CNanoparticlesNeutralization TestsPolysaccharidesTobacco Mosaic VirusAntibodies, MonoclonalAntibodies, NeutralizingAntibodies, ViralEpitopesPolysaccharidesViral Envelope ProteinsEnvelopeGlycan loopNeutralizing antibodiesZika

Identifiers

PMID32234060
PMCPMC7110905
OpenAlexW3014243634

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.