Evidence map›Paper›PMID 32232353›Full record

ArticleNucleic acids research2020

A newly identified Leishmania IF4E-interacting protein, Leish4E-IP2, modulates the activity of cap-binding protein paralogs.

Nitin Tupperwar, Shimi Meleppattu, Rohit Shrivastava, Nofar Baron, Ayelet Gilad, Gerhard Wagner, Mélissa Léger-Abraham, Michal Shapira

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. LeishIF3d is a non-canonical cap-binding protein inFrontiers in molecular biosciences · 2023
    Article
  3. Characterization of an Atypical eIF4E Ortholog inInternational journal of molecular sciences · 2021
    Article
  4. LeishIF4E-5 Is a Promastigote-Specific Cap-Binding Protein inInternational journal of molecular sciences · 2021
    Article
  5. Article
  6. Article
  7. Computational study on the allosteric mechanism ofComputational and structural biotechnology journal · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Nitin TupperwarDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva 84105, Israel.
Shimi MeleppattuDepartment of Microbiology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA.
Rohit ShrivastavaDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva 84105, Israel.
Nofar BaronDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva 84105, Israel.
Ayelet GiladDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva 84105, Israel.
Gerhard WagnerDepartment of Biological Chemistry and Molecular Pharmacology, Blavatnik Institute, Harvard Medical School, Boston, MA 02138, USA.
Mélissa Léger-AbrahamDepartment of Microbiology, Blavatnik Institute, Harvard Medical School, Boston, MA 02115, USA.
Michal ShapiraDepartment of Life Sciences, Ben-Gurion University of the Negev, Beer Sheva 84105, Israel.
Ben-Gurion University of the Negev · ILHarvard University · US

Funding

Roles of Eukaryotic Translation Initiation Factors in Gene ExpressionR01CA200913 · NCI · HARVARD MEDICAL SCHOOL · PI WAGNER, GERHARD · 2016 to 2020
$2.3M
The translation apparatus of Leishmania: from basic analysis to pursuit of novelR01AI108718 · NIAID · HARVARD MEDICAL SCHOOL · PI WAGNER, GERHARD · 2014 to 2017
$1.4M
NCI NIH HHS R01 CA200913NIAID NIH HHS R01 AI108718
6 · The paper itself

Abstract

Translation of most cellular mRNAs in eukaryotes proceeds through a cap-dependent pathway, whereby the cap-binding complex, eIF4F, anchors the preinitiation complex at the 5' end of mRNAs and regulates translation initiation. The requirement of Leishmania to survive in changing environments can explain why they encode multiple eIF4E (LeishIF4Es) and eIF4G (LeishIF4Gs) paralogs, as each could be assigned a discrete role during their life cycle. Here we show that the expression and activity of different LeishIF4Es change during the growth of cultured promastigotes, urging a search for regulatory proteins. We describe a novel LeishIF4E-interacting protein, Leish4E-IP2, which contains a conserved Y(X)4LΦ IF4E-binding-motif. Despite its capacity to bind several LeishIF4Es, Leish4E-IP2 was not detected in m7GTP-eluted cap-binding complexes, suggesting that it could inhibit the cap-binding activity of LeishIF4Es. Using a functional assay, we show that a recombinant form of Leish4E-IP2 inhibits the cap-binding activity of LeishIF4E-1 and LeishIF4E-3. Furthermore, we show that transgenic parasites expressing a tagged version of Leish4E-IP2 also display reduced cap-binding activities of tested LeishIF4Es, and decreased global translation. Given its ability to bind more than a single LeishIF4E, we suggest that Leish4E-IP2 could serve as a broad-range repressor of Leishmania protein synthesis.

Indexed as

Eukaryotic Initiation Factor-4FLeishmaniaProtein BiosynthesisProtozoan ProteinsRNA CapsEukaryotic Initiation Factor-4FProtozoan ProteinsRNA Caps

Identifiers

PMID32232353
PMCPMC7192595
OpenAlexW3013616076

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.