Evidence map›Paper›PMID 32230706›Full record

ArticleJournal of fungi (Basel, Switzerland)2020

Impact of ITS-Based Sequencing on Antifungal Treatment of Patients with Suspected Invasive Fungal Infections.

Sara Guenter, Gregor Gorkiewicz, Bettina Halwachs, Karl Kashofer, Andrea Thueringer, Phillip Wurm, Ines Zollner-Schwetz, Thomas Valentin, Juergen Prattes, Stefanie Wunsch and 4 more

Open access · goldAbstract read
In one paragraph

Article in Journal of fungi (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.1field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. TheCurrent fungal infection reports · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 2 countries.

Sara GuenterSection of Infectious Diseases and Tropical Medicine, Department of Internal Medicine, Medical University of Graz, Graz 8010, Austria.
Gregor GorkiewiczDiagnostic and Research Institute of Pathology, Medical University of Graz, Graz 8010, Austria.
Bettina HalwachsDiagnostic and Research Institute of Pathology, Medical University of Graz, Graz 8010, Austria.
Karl KashoferDiagnostic and Research Institute of Pathology, Medical University of Graz, Graz 8010, Austria.
Andrea ThueringerDiagnostic and Research Institute of Pathology, Medical University of Graz, Graz 8010, Austria.
Phillip WurmDiagnostic and Research Institute of Pathology, Medical University of Graz, Graz 8010, Austria.
Ines Zollner-SchwetzSection of Infectious Diseases and Tropical Medicine, Department of Internal Medicine, Medical University of Graz, Graz 8010, Austria.
Thomas ValentinSection of Infectious Diseases and Tropical Medicine, Department of Internal Medicine, Medical University of Graz, Graz 8010, Austria.
Juergen PrattesSection of Infectious Diseases and Tropical Medicine, Department of Internal Medicine, Medical University of Graz, Graz 8010, Austria.
Stefanie WunschSection of Infectious Diseases and Tropical Medicine, Department of Internal Medicine, Medical University of Graz, Graz 8010, Austria.
Elisabeth UllrichSection of Infectious Diseases and Tropical Medicine, Department of Internal Medicine, Medical University of Graz, Graz 8010, Austria.
Christoph ZurlSection of Infectious Diseases and Tropical Medicine, Department of Internal Medicine, Medical University of Graz, Graz 8010, Austria.
Martin HoeniglSection of Infectious Diseases and Tropical Medicine, Department of Internal Medicine, Medical University of Graz, Graz 8010, Austria.
Robert KrauseSection of Infectious Diseases and Tropical Medicine, Department of Internal Medicine, Medical University of Graz, Graz 8010, Austria.
Medical University of Graz · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Molecular techniques including the sequencing of fungal-specific DNA targets are increasingly used in the diagnosis of suspected invasive fungal infections. In contrast to established biomarkers like galactomannan or 1-3-β-d-glucan, the clinical impact of these methods remains unknown. We retrospectively investigated the impact of ITS1-sequencing on antifungal treatment strategies in 71 patients (81 samples) with suspected invasive fungal infections. ITS-sequencing either confirmed already ongoing antifungal therapy (19/71 patients, 27%), led to a change in antifungal therapy (11/71, 15%) or supported the decision to withhold antifungal treatment (34/71, 48%) (in seven of 71 patients, ITS-sequencing results were obtained postmortem). ITS-sequencing results led to a change in antifungal therapy in a relevant proportion of patients, while it confirmed therapeutic strategies in the majority. Therefore, ITS-sequencing was a useful adjunct to other fungal diagnostic measures in our cohort.

Indexed as

antifungal therapyinvasive fungal infectionsITS-sequencing

Identifiers

PMID32230706
PMCPMC7345167
OpenAlexW3013605967

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.