Evidence map›Paper›PMID 32228861›Full record

ArticleeLife2020

Approaching boiling point stability of an alcohol dehydrogenase through computationally-guided enzyme engineering.

Friso S Aalbers, Maximilian Jlj Fürst, Stefano Rovida, Milos Trajkovic, J Rubén Gómez Castellanos, Sebastian Bartsch, Andreas Vogel, Andrea Mattevi, Marco W Fraaije

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Catalytic Stability ofInternational journal of molecular sciences · 2024
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Enhancing computational enzyme design by a maximum entropy strategy.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  16. Article
  17. Review
  18. Using Mutability Landscapes To Guide Enzyme Thermostabilization.Chembiochem : a European journal of chemical biology · 2021
    Article
  19. Harnessing Conformational Plasticity to Generate Designer Enzymes.Journal of the American Chemical Society · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 5 countries.

Friso S AalbersMolecular Enzymology Group, University of Groningen, Groningen, Netherlands.ORCID 0000-0002-2142-9661
Maximilian Jlj FürstMolecular Enzymology Group, University of Groningen, Groningen, Netherlands.ORCID 0000-0001-7720-9214
Stefano RovidaDepartment of Biology and Biotechnology "L. Spallanzani", University of Pavia, Pavia, Italy.
Milos TrajkovicMolecular Enzymology Group, University of Groningen, Groningen, Netherlands.
J Rubén Gómez CastellanosDepartment of Biology and Biotechnology "L. Spallanzani", University of Pavia, Pavia, Italy.
Sebastian Bartschc-LEcta GmbH, Leipzig, Germany.
Andreas Vogelc-LEcta GmbH, Leipzig, Germany.
Andrea MatteviDepartment of Biology and Biotechnology "L. Spallanzani", University of Pavia, Pavia, Italy.ORCID 0000-0002-9523-7128
Marco W FraaijeMolecular Enzymology Group, University of Groningen, Groningen, Netherlands.ORCID 0000-0001-6346-5014
University of Groningen · NLUniversity of Pavia · ITHarvard University · US

Funding

European Commission 635734
6 · The paper itself

Abstract

Enzyme instability is an important limitation for the investigation and application of enzymes. Therefore, methods to rapidly and effectively improve enzyme stability are highly appealing. In this study we applied a computational method (FRESCO) to guide the engineering of an alcohol dehydrogenase. Of the 177 selected mutations, 25 mutations brought about a significant increase in apparent melting temperature (Δ

Indexed as

MutationTransition TemperatureAlcohol DehydrogenaseComputers, MolecularCrystallizationEnzyme StabilityEscherichia coliGene LibraryKineticsProtein ConformationProtein EngineeringSaccharomycetalesAlcohol Dehydrogenasealcohol dehydrogenasebiocatalysisbiotechnologycofactorcomputational biologyE. colienzyme engineeringmolecular biophysicsoxidationsstructural biologysystems biology

Identifiers

PMID32228861
PMCPMC7164962
OpenAlexW3013497518

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.