Evidence map›Paper›PMID 32228454›Full record

ArticleBMC microbiology2020

The molecular characters and antibiotic resistance of Clostridioides difficile from economic animals in China.

Wen-Zhu Zhang, Wen-Ge Li, Yu-Qing Liu, Wen-Peng Gu, Qing Zhang, Hu Li, Zheng-Jie Liu, Xin Zhang, Yuan Wu, Jin-Xing Lu

Abstract read
In one paragraph

Article in BMC microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
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  4. Antimicrobial resistance ofOne health (Amsterdam, Netherlands) · 2024
    Article
  5. Review
  6. [Analysis ofNan fang yi ke da xue xue bao = Journal of Southern Medical University · 2024
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  7. Article
  8. Review
  9. Microorganisms · 2023
    Article
  10. Make It LessGenes · 2022
    Review
  11. Genotyping and Antimicrobial Susceptibility ofPathogens (Basel, Switzerland) · 2021
    Article
  12. Comparative genomic and transmission analysis ofEmerging microbes & infections · 2021
    Article
  13. Animals : an open access journal from MDPI · 2021
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Wen-Zhu ZhangState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Prevention and Control, Beijing, China.
Wen-Ge LiState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Prevention and Control, Beijing, China.
Yu-Qing LiuInstitute of Animal Science and Veterinary Medicine, Shandong academy of agricultural Sciences, Jinan, China.
Wen-Peng GuDepartment of Acute Infectious Diseases Control and Prevention, Yunnan Provincial Centre for Disease Control and Prevention, Kunming, China.
Qing ZhangInstitute of Animal Science and Veterinary Medicine, Shandong academy of agricultural Sciences, Jinan, China.
Hu LiState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Prevention and Control, Beijing, China.
Zheng-Jie LiuState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Prevention and Control, Beijing, China.
Xin ZhangState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Prevention and Control, Beijing, China.
Yuan WuState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Prevention and Control, Beijing, China. wuyuan@icdc.cn.
Jin-Xing LuState Key Laboratory of Infectious Disease Prevention and Control, National Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Prevention and Control, Beijing, China.

Funding

the National Sci-Tech Key Project 2018ZX10733402the State Key Laboratory for Infectious Disease Prevention and Control in China CDC 2019SKLID317
6 · The paper itself

Abstract

backgroundIt has been performed worldwidely to explore the potential of animals that might be a reservoir for community associated human infections of Clostridioides difficile. Several genetically undistinguished PCR ribotypes of C. difficile from animals and human have been reported, illustrating potential transmission of C. difficile between them. Pig and calf were considered as the main origins of C. difficile with predominant RT078 and RT033, respectively. As more investigations involved, great diversity of molecular types from pig and calf were reported in Europe, North American and Australia. However, there were quite limited research on C. difficile isolates from meat animals in China, leading to non-comprehensive understanding of molecular epidemiology of C. difficile in China.

resultsA total of 55 C. difficile were isolated from 953 animal stool samples, within which 51 strains were from newborn dairy calf less than 7 days in Shandong Province. These isolates were divided into 3 STs and 6 RTs, of which ST11/RT126 was predominant type, and responsible for majority antibiotic resistance isolates. All the isolates were resistant to at least one tested antibiotics, however, only two multidrug resistant (MDR) isolates were identified. Furthermore, erythromycin (ERY) and clindamycin (CLI) were the two main resistant antibiotics. None of the isolates were resistant to vancomycin (VAN), metronidazole (MTZ), tetracycline (TET), and rifampin (RIF).

conclusionsIn this study, we analyzed the prevalence, molecular characters and antibiotic resistance of C. difficile from calf, sheep, chicken, and pig in China. Some unique features were found here: first, RT126 not RT078 were the dominant type from baby calf, and none isolates were got from pig; second, on the whole, isolates from animals display relative lower resistant rate to these 11 tested antibiotics, compared with isolates from human in China in our previous report. Our study helps to deep understanding the situation of C. difficile from economic animals in China, and to further study the potential transmission of C. difficile between meat animals and human.

Indexed as

Drug Resistance, BacterialAnimalsAnimals, NewbornAnti-Bacterial AgentsCattleChickensChinaClindamycinClostridioides difficileClostridium InfectionsErythromycinFecesMicrobial Sensitivity TestsMolecular EpidemiologyMolecular TypingPrevalenceAnti-Bacterial AgentsClindamycinErythromycinAntibiotics resistanceClostridioides difficileEconomic animal

Identifiers

PMID32228454
PMCPMC7106571

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.