Evidence map›Paper›PMID 32227258›Full record

ArticlePlant molecular biology2020

Bioactive compounds induced in Physalis angulata L. by methyl-jasmonate: an investigation of compound accumulation patterns and biosynthesis-related candidate genes.

Xiaori Zhan, Xiujun Luo, Jinyu He, Chengchao Zhang, Xinyue Liao, Xinyun Xu, Shangguo Feng, Chunna Yu, Zhifang Jiang, Yijun Meng and 3 more

Abstract read
PubMed Publisher
In one paragraph

Article in Plant molecular biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
3.2field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Advances inFrontiers in plant science · 2024
    Review
  4. The Integration of the Metabolome and Transcriptome forMolecules (Basel, Switzerland) · 2023
    Article
  5. Article
  6. Metabolic response to larval herbivory in threePlant signaling & behavior · 2021
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Xiaori ZhanCollege of Life and Environmental Science, Hangzhou Normal University, Hangzhou, 310036, China.
Xiujun LuoCollege of Life and Environmental Science, Hangzhou Normal University, Hangzhou, 310036, China.
Jinyu HeCollege of Life and Environmental Science, Hangzhou Normal University, Hangzhou, 310036, China.
Chengchao ZhangCollege of Life and Environmental Science, Hangzhou Normal University, Hangzhou, 310036, China.
Xinyue LiaoCollege of Life and Environmental Science, Hangzhou Normal University, Hangzhou, 310036, China.
Xinyun XuCollege of Life and Environmental Science, Hangzhou Normal University, Hangzhou, 310036, China.
Shangguo FengCollege of Life and Environmental Science, Hangzhou Normal University, Hangzhou, 310036, China.
Chunna YuCollege of Life and Environmental Science, Hangzhou Normal University, Hangzhou, 310036, China.
Zhifang JiangCollege of Life and Environmental Science, Hangzhou Normal University, Hangzhou, 310036, China.
Yijun MengCollege of Life and Environmental Science, Hangzhou Normal University, Hangzhou, 310036, China.
Chenjia ShenCollege of Life and Environmental Science, Hangzhou Normal University, Hangzhou, 310036, China.
Huizhong WangCollege of Life and Environmental Science, Hangzhou Normal University, Hangzhou, 310036, China. whz62@163.com.
Jiangjie LuCollege of Life and Environmental Science, Hangzhou Normal University, Hangzhou, 310036, China. lujj@hznu.edu.cn.
Hangzhou Normal University · CN

Funding

Major Increase or Decrease Program In The Central Finance Level 2060302Major Research Plan 31470407Major Research Plan 31970346
6 · The paper itself

Abstract

key messageWe employed both metabolomic and transcriptomic approaches to explore the accumulation patterns of physalins, flavonoids and chlorogenic acid in Physalis angulata and revealed the genes associated with the biosynthesis of bioactive compounds under methyl-jasmonate (MeJA) treatment. Physalis angulata L. is an annual Solanaceae plant with a number of medicinally active compounds. Despite the potential pharmacological benefits of P. angulata, the scarce genomic information regarding this plant has limited the studies on the mechanisms of bioactive compound biosynthesis. To facilitate the basic understanding of the main chemical constituent biosynthesis pathways, we performed both metabolomic and transcriptomic approaches to reveal the genes associated with the biosynthesis of bioactive compounds under methyl-jasmonate (MeJA) treatment. Untargeted metabolome analysis showed that most physalins, flavonoids and chlorogenic acid were significantly upregulated. Targeted HPLC-MS/MS analysis confirmed variations in the contents of two important representative steroid derivatives (physalins B and G), total flavonoids, neochlorogenic acid, and chlorogenic acid between MeJA-treated plants and controls. Transcript levels of a few steroid biosynthesis-, flavonoid biosynthesis-, and chlorogenic acid biosynthesis-related genes were upregulated, providing a potential explanation for MeJA-induced active ingredient synthesis in P. angulata. Systematic correlation analysis identified a number of novel candidate genes associated with bioactive compound biosynthesis. These results may help to elucidate the regulatory mechanism underlying MeJA-induced active compound accumulation and provide several valuable candidate genes for further functional study.

Indexed as

AcetatesCyclopentanesFlavonoidsGene Expression Regulation, PlantMetabolomeMolecular StructureOxylipinsPhysalisPlant Growth RegulatorsPlant ProteinsPlant RootsRNA, PlantTranscriptomeAcetatesCyclopentanesFlavonoidsmethyl jasmonateOxylipinsPlant Growth RegulatorsPlant ProteinsRNA, PlantChlorogenic acidFlavonoidsMethyl-jasmonate (MeJA)PhysalinsPhysalisWithanolides

Identifiers

PMID32227258
OpenAlexW3012953405

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.