Evidence map›Paper›PMID 32224899›Full record

ReviewViruses2020

Key Role of the Influenza A Virus PA Gene Segment in the Emergence of Pandemic Viruses.

Michael M Lutz Iv, Megan M Dunagan, Yuki Kurebayashi, Toru Takimoto

Open access · goldAbstract readReview
In one paragraph

Review in Viruses, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Michael M Lutz IvDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY 14642 USA.ORCID 0000-0002-3318-0808
Megan M DunaganDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY 14642 USA.
Yuki KurebayashiDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY 14642 USA.
Toru TakimotoDepartment of Microbiology and Immunology, University of Rochester Medical Center, Rochester, NY 14642 USA.
University of Rochester Medical Center · USUniversity of Shizuoka · JP

Funding

Training in Cellular, Biochemical and Molecular SciencesT32GM068411 · NIGMS · UNIVERSITY OF ROCHESTER · PI MAQUAT, LYNNE E · 2005 to 2019
$3.9M
Infection and Immunity: The Pathogenesis of Host-Microbe InteractionsT32AI118689 · NIAID · UNIVERSITY OF ROCHESTER · PI Paul M. Dunman, BRIAN M WARD · 2015 to 2026
$2.5M
Influenza virus host shutoff mechanismR01AI129988 · NIAID · UNIVERSITY OF ROCHESTER · PI TAKIMOTO, TORU · 2017 to 2021
$1.9M
NIAID NIH HHS R01 AI129988NIAID NIH HHS T32 AI118689NIGMS NIH HHS T32 GM068411
6 · The paper itself

Abstract

Influenza A viruses (IAVs) are a significant human pathogen that cause seasonal epidemics and occasional pandemics. Avian waterfowl are the natural reservoir of IAVs, but a wide range of species can serve as hosts. Most IAV strains are adapted to one host species and avian strains of IAV replicate poorly in most mammalian hosts. Importantly, IAV polymerases from avian strains function poorly in mammalian cells but host adaptive mutations can restore activity. The 2009 pandemic H1N1 (H1N1pdm09) virus acquired multiple mutations in the PA gene that activated polymerase activity in mammalian cells, even in the absence of previously identified host adaptive mutations in other polymerase genes. These mutations in PA localize within different regions of the protein suggesting multiple mechanisms exist to activate polymerase activity. Additionally, an immunomodulatory protein, PA-X, is expressed from the PA gene segment. PA-X expression is conserved amongst many IAV strains but activity varies between viruses specific for different hosts, suggesting that PA-X also plays a role in host adaptation. Here, we review the role of PA in the emergence of currently circulating H1N1pdm09 viruses and the most recent studies of host adaptive mutations in the PA gene that modulate polymerase activity and PA-X function.

Indexed as

Host-Pathogen InteractionsAdaptation, BiologicalHumansInfluenza A virusInfluenza, HumanModels, MolecularMutationProtein ConformationRNA-Dependent RNA PolymeraseStructure-Activity RelationshipRNA-Dependent RNA Polymerasehost adaptationinfluenza A virusPAPA-XRNA-dependent RNA polymerase

Identifiers

PMID32224899
PMCPMC7232137
OpenAlexW3013064940

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.