Evidence map›Paper›PMID 32224263›Full record

ArticleMetabolic engineering2020

Total in vitro biosynthesis of the nonribosomal macrolactone peptide valinomycin.

Lei Zhuang, Shuhui Huang, Wan-Qiu Liu, Ashty S Karim, Michael C Jewett, Jian Li

Open access · greenAbstract read
In one paragraph

Article in Metabolic engineering, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
9.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed, 96 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
  14. BeyondChemical reviews · 2025
    Review
  15. Review
  16. Review
  17. Article
  18. Review
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Lei ZhuangSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China; School of Life Science and Technology, ShanghaiTech University, Shanghai, 201210, China.
Shuhui HuangSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China.
Wan-Qiu LiuSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China.
Ashty S KarimDepartment of Chemical and Biological Engineering, Center for Synthetic Biology, Northwestern University, Evanston, IL, 60208, United States.
Michael C JewettDepartment of Chemical and Biological Engineering, Center for Synthetic Biology, Northwestern University, Evanston, IL, 60208, United States. Electronic address: m-jewett@northwestern.edu.
Jian LiSchool of Physical Science and Technology, ShanghaiTech University, Shanghai, 201210, China. Electronic address: lijian@shanghaitech.edu.cn.
ShanghaiTech University · CNNorthwestern University · US

Funding

Innovative technologies to transform antibiotic discovery. Project 4 Infection site-specific amplification of antimicrobial conjugatesU19AI142780 · NIAID · BROAD INSTITUTE, INC. · PI HUNG, DEBORAH T · 2019 to 2023
$33.9M
NIAID NIH HHS U19 AI142780
6 · The paper itself

Abstract

Natural products are important because of their significant pharmaceutical properties such as antiviral, antimicrobial, and anticancer activity. Recent breakthroughs in DNA sequencing reveal that a great number of cryptic natural product biosynthetic gene clusters are encoded in microbial genomes, for example, those of Streptomyces species. However, it is still challenging to access compounds from these clusters because many source organisms are uncultivable or the genes are silent during laboratory cultivation. To address this challenge, we develop an efficient cell-free platform for the rapid, in vitro total biosynthesis of the nonribosomal peptide valinomycin as a model. We achieve this goal in two ways. First, we used a cell-free protein synthesis (CFPS) system to express the entire valinomycin biosynthetic gene cluster (>19 kb) in a single-pot reaction, giving rise to approximately 37 μg/L of valinomycin after optimization. Second, we coupled CFPS with cell-free metabolic engineering system by mixing two enzyme-enriched cell lysates to perform a two-stage biosynthesis. This strategy improved valinomycin production ~5000-fold to nearly 30 mg/L. We expect that cell-free biosynthetic systems will provide a new avenue to express, discover, and characterize natural product gene clusters of interest in vitro.

Indexed as

Anti-Bacterial AgentsBioengineeringCell-Free SystemEscherichia coliGenes, BacterialMetabolic EngineeringMultigene FamilyStreptomycesValinomycinAnti-Bacterial AgentsValinomycinCell-free systemsIn vitro biosynthesisNatural productNonribosomal peptideSynthetic biologyValinomycin

Identifiers

PMID32224263
PMCPMC8190601
OpenAlexW3013964032

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.