Evidence map›Paper›PMID 32222890›Full record

ArticleMolecular diversity2021

Drug design by machine-trained elastic networks: predicting Ser/Thr-protein kinase inhibitors' activities.

Cyrus Ahmadi Toussi, Javad Haddadnia, Chérif F Matta

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular diversity, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 3 institutions in 2 countries.

Cyrus Ahmadi ToussiDepartment of Biomedical Engineering, Hakim Sabzevari University, Sabzevar, Iran.
Javad HaddadniaDepartment of Biomedical Engineering, Hakim Sabzevari University, Sabzevar, Iran.
Chérif F MattaDepartment of Chemistry, Dalhousie University, Halifax, NS, B3H4J3, Canada. cherif.matta@msvu.ca.
Dalhousie University · CAHakim Sabzevari University · IRMount Saint Vincent University · CA

Funding

Natural Sciences and Engineering Research Coucil of Canada DG-2015
6 · The paper itself

Abstract

An elastic network model (ENM) represents a molecule as a matrix of pairwise atomic interactions. Rich in coded information, ENMs are hereby proposed as a novel tool for the prediction of the activity of series of molecules, with widely different chemical structures, but a common biological activity. The new approach is developed and tested using a set of 183 inhibitors of serine/threonine-protein kinase enzyme (Plk3) which is an enzyme implicated in the regulation of cell cycle and tumorigenesis. The elastic network (EN) predictive model is found to exhibit high accuracy and speed compared to descriptor-based machine-trained modeling. EN modeling appears to be a highly promising new tool for the high demands of industrial applications such as drug and material design.

Indexed as

Models, MolecularDrug DesignMachine LearningProtein Kinase InhibitorsProtein Serine-Threonine KinasesQuantitative Structure-Activity RelationshipTumor Suppressor ProteinsProtein Kinase InhibitorsProtein Serine-Threonine KinasesTumor Suppressor ProteinsArtificial intelligenceElastic network modelsMachine learningNormal modesQuantitative structure–activity relationships (QSAR)Serine/threonine-protein kinase inhibitors

Identifiers

PMID32222890
OpenAlexW3013625695

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.