Evidence map›Paper›PMID 32221922›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2020

CRISPR/Cas9 Technology Applied to the Study of Proteins Involved in Calcium Signaling in Trypanosoma cruzi.

Noelia Lander, Miguel A Chiurillo, Roberto Docampo

Open access · greenAbstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Noelia Lander *Center for Tropical and Emerging Global Diseases, University of Georgia, Athens, GA, USA. noelia@uga.edu.
Miguel A Chiurillo *Center for Tropical and Emerging Global Diseases, University of Georgia, Athens, GA, USA.
Roberto DocampoCenter for Tropical and Emerging Global Diseases, University of Georgia, Athens, GA, USA. rdocampo@uga.edu.
University of Georgia · US

Funding

Pathogenesis of Trypanosoma cruzi infectionR01AI107663 · NIAID · UNIVERSITY OF GEORGIA · PI DOCAMPO, ROBERTO · 2014 to 2017
$1.5M
Drug Target Validation in Trypanosoma cruziR21AI140421 · NIAID · UNIVERSITY OF GEORGIA · PI DOCAMPO, ROBERTO · 2018 to 2019
$413k
Pathogenesis of Trypanosoma cruzi infectionR56AI107663 · NIAID · UNIVERSITY OF GEORGIA · PI DOCAMPO, ROBERTO · 2013 to 2013
$350k
NIAID NIH HHS R01 AI107663NIAID NIH HHS R21 AI140421NIAID NIH HHS R56 AI107663
6 · The paper itself

Abstract

Chagas disease is a vector-borne tropical disease affecting millions of people worldwide, for which there is no vaccine or satisfactory treatment available. It is caused by the protozoan parasite Trypanosoma cruzi and considered endemic from North to South America. This parasite has unique metabolic and structural characteristics that make it an attractive organism for basic research. The genetic manipulation of T. cruzi has been historically challenging, as compared to other pathogenic protozoans. However, the use of the prokaryotic CRISPR/Cas9 system for genome editing has significantly improved the ability to generate genetically modified T. cruzi cell lines, becoming a powerful tool for the functional study of proteins in different stages of this parasite's life cycle, including infective trypomastigotes and intracellular amastigotes. Using the CRISPR/Cas9 method that we adapted to T. cruzi, it has been possible to perform knockout, complementation and in situ tagging of T. cruzi genes. In our system we cotransfect T. cruzi epimastigotes with an expression vector containing the Cas9 sequence and a single guide RNA, together with a donor DNA template to promote DNA break repair by homologous recombination. As a result, we have obtained homogeneous populations of mutant epimastigotes using a single resistance marker to modify both alleles of the gene. Mitochondrial Ca

Indexed as

Calcium SignalingGene EditingGenes, ProtozoanProtozoan ProteinsRNA, Guide, KinetoplastidaTrypanosoma cruziCalcium ChannelsCRISPR-Cas SystemsEnergy MetabolismGene Knockout TechniquesGenetic VectorsInositol 1,4,5-Trisphosphate ReceptorsLife Cycle StagesParasitologyPhosphoprotein PhosphatasesCalcium ChannelsInositol 1,4,5-Trisphosphate Receptorsmitochondrial calcium uniporterPhosphoprotein PhosphatasesProtozoan ProteinsRNA, Guide, KinetoplastidaCalcium signalingCRISPR/Cas9Endogenous gene taggingGene complementationGene knockoutGenome editingInositol 1,4,5-trisphosphate receptorMitochondrial calcium uniporterPyruvate dehydrogenase phosphataseTrypanosoma cruzi

Identifiers

PMID32221922
PMCPMC10411612
OpenAlexW3013539441

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.