Evidence map›Paper›PMID 32220242›Full record

ArticleBMC plant biology2020

Transcriptomic and metabolomic analysis provides insights into anthocyanin and procyanidin accumulation in pear.

Zhen Zhang, Changping Tian, Ya Zhang, Chenzhiyu Li, Xi Li, Qiang Yu, Shuo Wang, Xinyu Wang, Xuesen Chen, Shouqian Feng

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

43 citing papers in PubMed, 76 citations in OpenAlex.

  1. Article
  2. Review
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  4. Article
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  6. The genomic design of fruit metabolomes.Plant communications · 2025
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  12. Genome-Wide Identification ofInternational journal of molecular sciences · 2024
    Article
  13. Article
  14. Frontiers in plant science · 2024
    Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Zhen ZhangState Key Laboratory of Crop Biology, Shandong Agricultural University, No.61, Daizong Road, Tai'an, 271018, China.
Changping TianCherry Research Department, Yantai Agricultural Science and Technology Institute, No.26, West Gangcheng Street, Yan'tai, 265500, China.
Ya ZhangState Key Laboratory of Crop Biology, Shandong Agricultural University, No.61, Daizong Road, Tai'an, 271018, China.
Chenzhiyu LiState Key Laboratory of Crop Biology, Shandong Agricultural University, No.61, Daizong Road, Tai'an, 271018, China.
Xi LiState Key Laboratory of Crop Biology, Shandong Agricultural University, No.61, Daizong Road, Tai'an, 271018, China.
Qiang YuCherry Research Department, Yantai Agricultural Science and Technology Institute, No.26, West Gangcheng Street, Yan'tai, 265500, China.
Shuo WangState Key Laboratory of Crop Biology, Shandong Agricultural University, No.61, Daizong Road, Tai'an, 271018, China.
Xinyu WangState Key Laboratory of Crop Biology, Shandong Agricultural University, No.61, Daizong Road, Tai'an, 271018, China.
Xuesen ChenState Key Laboratory of Crop Biology, Shandong Agricultural University, No.61, Daizong Road, Tai'an, 271018, China.
Shouqian FengState Key Laboratory of Crop Biology, Shandong Agricultural University, No.61, Daizong Road, Tai'an, 271018, China. Shouqianlove@sdau.edu.cn.
Shandong Agricultural University · CNYantai Academy of Agricultural Sciences · CN

Funding

Agricultural Improved Seed Project of Shandong Province 2019LZGC008the National Key Research and Development Program of China 2018YFD1000105the National Natural Science Foundation of China 31201593 and 31872940
6 · The paper itself

Abstract

backgroundPear is one of the most important fruit crops worldwide. Anthocyanins and procyanidins (PAs) are important secondary metabolites that affect the appearance and nutritive quality of pear. However, few studies have focused on the molecular mechanism underlying anthocyanin and PA accumulation in pear.

resultsWe conducted metabolome and transcriptome analyses to identify candidate genes involved in anthocyanin and PA accumulation in young fruits of the pear cultivar 'Clapp Favorite' (CF) and its red mutation cultivar 'Red Clapp Favorite' (RCF). Gene-metabolite correlation analyses revealed a 'core set' of 20 genes that were strongly correlated with 10 anthocyanin and seven PA metabolites. Of these, PcGSTF12 was confirmed to be involved in anthocyanin and PA accumulation by complementation of the tt19-7 Arabidopsis mutant. Interestingly, PcGSTF12 was found to be responsible for the accumulation of procyanidin A3, but not petunidin 3, 5-diglucoside, opposite to the function of AtGSTs in Arabidopsis. Transformation with PcGSTF12 greatly promoted or repressed genes involved in anthocyanin and PA biosynthesis, regulation, and transport. Electrophoretic mobility shift and luciferase reporter assays confirmed positive regulation of PcGSTF12 by PcMYB114.

conclusionThese findings identify a core set of genes for anthocyanin and PA accumulation in pear. Of these, PcGSTF12, was confirmed to be involved in anthocyanin and PA accumulation. Our results also identified an important anthocyanin and PA regulation node comprising two core genes, PcGSTF12 and PcMYB114. These results provide novel insights into anthocyanin and PA accumulation in pear and represent a valuable data set to guide future functional studies and pear breeding.

Indexed as

MetabolomeTranscriptomeAnthocyaninsBiflavonoidsCatechinFruitProanthocyanidinsPyrusAnthocyaninsBiflavonoidsCatechinProanthocyanidinsprocyanidinAnthocyaninMetabolome and transcriptome analysesPcGSTF12PcMYB114PearProcyanidin

Identifiers

PMID32220242
PMCPMC7099803
OpenAlexW3013262881

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.