Evidence map›Paper›PMID 32219771›Full record

ArticleMolecular biology reports2020

Methodology to analyze gene expression patterns of early mammary development in pig models.

Matthew A Moss, Breanne Williams, Farzana Ferdous, Tom Scott, Heather W Dunn

Open access · hybridAbstract read
PubMed Publisher
In one paragraph

Article in Molecular biology reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 1 country.

Matthew A MossCold Spring Harbor Laboratory Cancer Center, Cold Spring Harbor Laboratory, Bungtown, NY, USA.
Breanne WilliamsCollege of Veterinary Medicine, Auburn University, Auburn, AL, USA.
Farzana FerdousDepartment of Biology, Lander University, Greenwood, SC, USA.ORCID http://orcid.org/0000-0002-3468-6608
Tom ScottDepartment of Animal and Veterinary Sciences, Clemson University, 123 Poole Agriculture Building, Clemson, SC, 29634, USA.ORCID http://orcid.org/0000-0002-3657-452X
Heather W DunnDepartment of Animal and Veterinary Sciences, Clemson University, 123 Poole Agriculture Building, Clemson, SC, 29634, USA. walkerd@clemson.edu.ORCID http://orcid.org/0000-0001-6816-3453
Clemson University · USAuburn University · USCold Spring Harbor Laboratory · USLander University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In mammary gland development, normal stem cell activity occurs in the embryonic stage and postnatally. Research supports that certain breast cancers contain a small sub-population of cells that mimic stem-like activity. It is believed stem cell activation in the mutated mature human mammary tissue is what drives quiescent epithelial cells to convert to mesenchymal states initiating migration, invasion, and metastasis in breast cancer. The goal of the work reported herein was to investigate early mammary development gene expression in the postnatal pig using fine needle biopsy methods in order to establish a reliable model for human breast cancer detection. Tissue samples were collected from pig mammary glands beginning at Day 11 of age through Day 39 in order to capture early postnatal-growth gene expression. Based on the initial clustering analysis, two distinct clusters of gene expression profiles occurred before and after Day 25 of mammary development. Gene set enrichment analysis (GSEA) ontology indicated the cellular processes that changed after Day 25, and many of these processes were implicated in epithelial-mesenchymal transition (EMT) signaling events. Gene expression in the postnatal pig was compared with the Epithelial-Mesenchymal Transition gene database (dbEMT) confirming the presence of EMT activity in this early developmental program. Information from this study will provide insight into early postnatal mammary gland development. In addition, mechanisms exploited by mutated mammary epithelial cells leading to cancer initiation and growth may be detected considering that mutated mammary epithelial cells can reactivate early developmental signals.

Indexed as

AnimalsBreast NeoplasmsEpithelial CellsEpithelial-Mesenchymal TransitionFemaleGene ExpressionGene Expression ProfilingGene Expression Regulation, NeoplasticMammary Glands, AnimalOrganogenesisSignal TransductionStem CellsSwineTranscriptomeBreast cancerDevelopmentGene expressionMammaryPig model

Identifiers

PMID32219771
OpenAlexW3013551629

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.