ArticleFrontiers in plant science2020
Comparative Transcriptome Analysis Provides Insights Into Yellow Rind Formation and Preliminary Mapping of the
Article in Frontiers in plant science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed.
- Watermelon Rind: Nutritional Composition, Therapeutic Potential, Environmental Impact, and Commercial Applications in Sustainable Industries.Current pharmaceutical design · 2026Review
- Genomic resources and genetic improvement of vital tropical and subtropical fruit crops: current status and prospects.AoB PLANTS · 2025Review
- Map-based cloning and functional validation of ClChlH governing yellow rind color in watermelon (Citrullus lanatus).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- The KNOX transcription factor ClSP activates ClAPRR2 to regulate dark green stripe formation in watermelon.Plant biotechnology journal · 2025Article
- Identification of Candidate Genes for Green Rind Color in Watermelon.Plants (Basel, Switzerland) · 2025Article
- Mapping and transcriptomic profiling reveal that the KNAT6 gene is involved in the dark green peel colour of mature pumpkin fruit (Cucurbita maxima L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Conjunctive BSA-Seq and BSR-Seq to Map the Genes of Yellow Leaf Mutations in Hot Peppers (Genes · 2024Article
- An R2R3-MYB Transcriptional FactorGenes · 2024Article
- Evaluation of physicochemical, antioxidant, antibacterial activity, and sensory properties of watermelon rind candy.Heliyon · 2023Article
- High-quality genome assembly and genetic mapping reveal a gene regulating flesh color in watermelon (Frontiers in plant science · 2023Article
- Differences of rhizospheric and endophytic bacteria are recruited by different watermelon phenotypes relating to rind colors formation.Scientific reports · 2022Article
- QTL mapping identifies novel loci and putative candidate genes for rind traits in watermelon.3 Biotech · 2022Article
- Genome-wide analysis of IQD proteins and ectopic expression of watermelon ClIQD24 in tomato suggests its important role in regulating fruit shape.Frontiers in genetics · 2022Article
- Primary mapping of quantitative trait loci regulating multivariate horticultural phenotypes of watermelon (Frontiers in plant science · 2022Article
- Mapping of Genetic Locus for Leaf Trichome Formation in Chinese Cabbage Based on Bulked Segregant Analysis.Plants (Basel, Switzerland) · 2021Article
- An SNP Mutation of GeneFrontiers in plant science · 2021Article
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Authors and funding
10 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
As an important appearance trait, the rind color of watermelon fruit affects the commodity value and further determines consumption choices. In this study, a comparative transcriptome analysis was conducted to elucidate the genes and pathways involved in the formation of yellow rind fruit in watermelon using a yellow rind inbred line WT4 and a green rind inbred line WM102. A total of 2,362 differentially expressed genes (DEGs) between WT4 and WM102 at three different stages (0, 7, and 14 DAP) were identified and 9,770 DEGs were obtained by comparing the expression level at 7 DAP and 14 DAP with the former stages of WT4. The function enrichment of DEGs revealed a number of pathways and terms in biological processes, cellular components, and molecular functions that were related to plant pigment metabolism, suggesting that there may be a group of common core genes regulating rind color formation. In addition, next-generation sequencing aided bulked-segregant analysis (BSA-seq) of the yellow rind pool and green rind pool selected from an F
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