Evidence map›Paper›PMID 32218650›Full record

ArticleJournal of chemical sciences (Bangalore, India)2015

Modeling the structure of SARS 3a transmembrane protein using a minimum unfavorable contact approach.

S Ramakrishna, Siladitya Padhi, U Deva Priyakumar

Open access · bronzeAbstract read
In one paragraph

Article in Journal of chemical sciences (Bangalore, India), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Urea-aromatic interactions in biology.Biophysical reviews · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

S RamakrishnaCenter for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Hyderabad, 500 032 India.
Siladitya PadhiCenter for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Hyderabad, 500 032 India.
U Deva PriyakumarCenter for Computational Natural Sciences and Bioinformatics, International Institute of Information Technology, Hyderabad, 500 032 India.
International Institute of Information Technology, Hyderabad · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

3a is an accessory protein from SARS coronavirus that is known to play a significant role in the proliferation of the virus by forming tetrameric ion channels. Although the monomeric units are known to consist of three transmembrane (TM) domains, there are no solved structures available for the complete monomer. The present study proposes a structural model for the transmembrane region of the monomer by employing our previously tested approach, which predicts potential orientations of TM ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s12039-015-0982-z) contains supplementary material, which is available to authorized users.

Indexed as

ion channelMembrane protein modelingmolecular dynamicsSARS 3a.transmembrane helicesviroporin

Identifiers

PMID32218650
PMCPMC7090505
OpenAlexW2248218100

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.