Evidence map›Paper›PMID 32218501›Full record

ArticleCommunications biology2020

An abscisic acid-responsive protein interaction network for sucrose non-fermenting related kinase1 in abiotic stress response.

Carina Steliana Carianopol, Aaron Lorheed Chan, Shaowei Dong, Nicholas J Provart, Shelley Lumba, Sonia Gazzarrini

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 60 citations in OpenAlex.

  1. Review
  2. Article
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  4. PtrbZIP12 improves drought resistance inHorticulture research · 2026
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  6. Review
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  8. Article
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  10. Review
  11. Article
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  13. Article
  14. The Time-Resolved Salt Stress Response ofInternational journal of molecular sciences · 2023
    Article
  15. Article
  16. Review
  17. Review
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Carina Steliana CarianopolDepartment of Biological Sciences, University of Toronto Scarborough, 1265 Military Trail, Toronto, ON, M1C 1A4, Canada.ORCID http://orcid.org/0000-0002-8029-8921
Aaron Lorheed ChanDepartment of Biological Sciences, University of Toronto Scarborough, 1265 Military Trail, Toronto, ON, M1C 1A4, Canada.
Shaowei DongDepartment of Cell and Systems Biology, University of Toronto, 25 Willcocks Street, Toronto, ON, M5S 3B2, Canada.
Nicholas J ProvartDepartment of Cell and Systems Biology, University of Toronto, 25 Willcocks Street, Toronto, ON, M5S 3B2, Canada.
Shelley LumbaDepartment of Cell and Systems Biology, University of Toronto, 25 Willcocks Street, Toronto, ON, M5S 3B2, Canada.ORCID http://orcid.org/0000-0002-8150-9292
Sonia GazzarriniDepartment of Biological Sciences, University of Toronto Scarborough, 1265 Military Trail, Toronto, ON, M1C 1A4, Canada. gazzarrini@utsc.utoronto.ca.ORCID http://orcid.org/0000-0003-4445-5659
University of Toronto · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Yeast Snf1 (Sucrose non-fermenting1), mammalian AMPK (5' AMP-activated protein kinase) and plant SnRK1 (Snf1-Related Kinase1) are conserved heterotrimeric kinase complexes that re-establish energy homeostasis following stress. The hormone abscisic acid (ABA) plays a crucial role in plant stress response. Activation of SnRK1 or ABA signaling results in overlapping transcriptional changes, suggesting these stress pathways share common targets. To investigate how SnRK1 and ABA interact during stress response in Arabidopsis thaliana, we screened the SnRK1 complex by yeast two-hybrid against a library of proteins encoded by 258 ABA-regulated genes. Here, we identify 125 SnRK1- interacting proteins (SnIPs). Network analysis indicates that a subset of SnIPs form signaling modules in response to abiotic stress. Functional studies show the involvement of SnRK1 and select SnIPs in abiotic stress responses. This targeted study uncovers the largest set of SnRK1 interactors, which can be used to further characterize SnRK1 role in plant survival under stress.

Indexed as

Protein Interaction MapsStress, PhysiologicalAbscisic AcidArabidopsisArabidopsis ProteinsGene Expression Regulation, EnzymologicGene Expression Regulation, PlantHigh-Throughput Nucleotide SequencingOsmotic PressurePlants, Genetically ModifiedProtein Serine-Threonine KinasesSalt StressSignal TransductionSodium ChlorideSorbitolTwo-Hybrid System TechniquesAbscisic AcidArabidopsis ProteinsAt3g01090 protein, ArabidopsisProtein Serine-Threonine KinasesSodium ChlorideSorbitol

Identifiers

PMID32218501
PMCPMC7099082
OpenAlexW3013966114

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.