Evidence map›Paper›PMID 32216018›Full record

ArticlePlant biotechnology journal2020

The strawberry transcription factor FaRAV1 positively regulates anthocyanin accumulation by activation of FaMYB10 and anthocyanin pathway genes.

Zuying Zhang, Yanna Shi, Yuchen Ma, Xiaofang Yang, Xueren Yin, Yuanyuan Zhang, Yuwei Xiao, Wenli Liu, Yunduan Li, Shaojia Li and 5 more

Open access · goldAbstract read
In one paragraph

Article in Plant biotechnology journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
9.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 152 citations in OpenAlex.

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4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 5 institutions in 3 countries.

Zuying ZhangCollege of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.
Yanna ShiCollege of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.
Yuchen MaCollege of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.
Xiaofang YangInstitute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou, China.
Xueren YinCollege of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.ORCID 0000-0002-1282-4432
Yuanyuan ZhangCollege of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.
Yuwei XiaoCollege of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.
Wenli LiuCollege of Mathematical Science, Zhejiang University, Hangzhou, China.
Yunduan LiCollege of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.
Shaojia LiCollege of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.
Xiaofen LiuCollege of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.
Donald GriersonState Agriculture Ministry Laboratory of Horticultural Plant Growth, Development and Quality Improvement, Zhejiang University, Hangzhou, China.
Andrew C AllanThe New Zealand Institute for Plant & Food Research Limited, Auckland, New Zealand.
Guihua JiangInstitute of Horticulture, Zhejiang Academy of Agricultural Sciences, Hangzhou, China.
Kunsong ChenCollege of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.ORCID 0000-0003-2874-2383
Zhejiang A & F University · CNZheJiang Academy of Agricultural Sciences · CNPlant & Food Research · NZUniversity of Nottingham · GBZhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The RAV (related to ABI3/viviparous 1) group of transcription factors (TFs) play multifaceted roles in plant development and stress responses. Here, we show that strawberry (Fragaria × ananassa) FaRAV1 positively regulates anthocyanin accumulation during fruit ripening via a hierarchy of activation processes. Dual-luciferase assay screening of all fruit-expressed AP2/ERFs showed FaRAV1 had the highest transcriptional activation of the promoter of FaMYB10, a key activator of anthocyanin biosynthesis. Yeast one-hybrid and electrophoretic mobility shift assays indicated that FaRAV1 could directly bind to the promoter of FaMYB10. Transient overexpression of FaRAV1 in strawberry fruit increased FaMYB10 expression and anthocyanin production significantly. Correspondingly, transient RNA interference-induced silencing of FaRAV1 led to decreases in FaMYB10 expression and anthocyanin content. Transcriptome analysis of FaRAV1-overexpressing strawberry fruit revealed that transcripts of phenylpropanoid and flavonoid biosynthesis pathway genes were up-regulated. Luciferase assays showed that FaRAV1 could also activate the promoters of strawberry anthocyanin biosynthetic genes directly, revealing a second level of FaRAV1 action in promoting anthocyanin accumulation. These results show that FaRAV1 stimulates anthocyanin accumulation in strawberry both by direct activation of anthocyanin pathway gene promoters and by up-regulation of FaMYB10, which also positively regulates these genes.

Indexed as

FragariaAnthocyaninsFruitGene Expression Regulation, PlantPlant ProteinsTranscription FactorsAnthocyaninsPlant ProteinsTranscription FactorsactivatoranthocyaninMYBRAVstrawberry

Identifiers

PMID32216018
PMCPMC7589338
OpenAlexW3013583108

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.