Evidence map›Paper›PMID 32214702›Full record

ArticleChinese science bulletin = Kexue tongbao2003

Phylogeny of SARS-CoV as inferred from complete genome comparison.

Zhen Qi, Yu Hu, Wei Li, Yanjun Chen, Zhihua Zhang, Shiwei Sun, Hongchao Lu, Jingfen Zhang, Dongbo Bu, Lunjiang Ling and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Chinese science bulletin = Kexue tongbao, 2003. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Zhen Qi1Institute of Biophysics, Chinese Academy of Sciences, 100101 Beijing, China.
Yu Hu2Institute of Computing Technology, Chinese Academy of Sciences, 100080 Beijing, China.
Wei Li1Institute of Biophysics, Chinese Academy of Sciences, 100101 Beijing, China.
Yanjun Chen1Institute of Biophysics, Chinese Academy of Sciences, 100101 Beijing, China.
Zhihua Zhang1Institute of Biophysics, Chinese Academy of Sciences, 100101 Beijing, China.
Shiwei Sun2Institute of Computing Technology, Chinese Academy of Sciences, 100080 Beijing, China.
Hongchao Lu2Institute of Computing Technology, Chinese Academy of Sciences, 100080 Beijing, China.
Jingfen Zhang2Institute of Computing Technology, Chinese Academy of Sciences, 100080 Beijing, China.
Dongbo Bu2Institute of Computing Technology, Chinese Academy of Sciences, 100080 Beijing, China.
Lunjiang Ling1Institute of Biophysics, Chinese Academy of Sciences, 100101 Beijing, China.
Runsheng Chen1Institute of Biophysics, Chinese Academy of Sciences, 100101 Beijing, China.
Chinese Academy of Sciences · CNInstitute of Biophysics · CNBGI Group (China) · CNInstitute of Computing Technology · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SARS-CoV, as the pathogeny of severe acute respiratory syndrome (SARS), is a mystery that the origin of the virus is still unknown even a few isolates of the virus were completely sequenced. To explore the genesis of SARS-CoV, the FDOD method previously developed by us was applied to comparing complete genomes from 12 SARS-CoV isolates to those from 12 previously identified coronaviruses and an unrooted phylogenetic tree was constructed. Our results show that all SARS-CoV isolates were clustered into a clique and previously identified coronaviruses formed the other clique. Meanwhile, the three groups of coronaviruses depart from each other clearly in our tree that is consistent with the results of prevenient papers. Differently, from the topology of the phylogenetic tree we found that SARS-CoV is more close to group 1 within genus coronavirus. The topology map also shows that the 12 SARS-CoV isolates may be divided into two groups determined by the association with the SARS-CoV from the Hotel M in Hong Kong that may give some information about the infectious relationship of the SARS.

Indexed as

coronavirusfunction of degree of disagreement (FDOD)infection relationshipphylogenySARS-associated coronavirus (SARS-CoV)

Identifiers

PMID32214702
PMCPMC7089017
OpenAlexW2159442911

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.