Evidence map›Paper›PMID 32214353›Full record

ArticlePloS one2020

A diagnostic real-time PCR assay for the rapid identification of the tomato-potato psyllid, Bactericera cockerelli (Šulc, 1909) and development of a psyllid barcoding database.

J C Sumner-Kalkun, M J Sjölund, Y M Arnsdorf, M Carnegie, F Highet, D Ouvrard, A F C Greenslade, J R Bell, R Sigvald, D M Kenyon

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.4field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 13 citations in OpenAlex.

  1. Article
  2. Article
  3. First Report of a Psyllid Vector of 'Plants (Basel, Switzerland) · 2025
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

J C Sumner-KalkunSASA, Edinburgh, United Kingdom.ORCID 0000-0002-6485-1731
M J SjölundSASA, Edinburgh, United Kingdom.ORCID 0000-0001-9599-3516
Y M ArnsdorfSASA, Edinburgh, United Kingdom.
M CarnegieSASA, Edinburgh, United Kingdom.
F HighetSASA, Edinburgh, United Kingdom.
D OuvrardDepartment of Life Sciences, Natural History Museum, London, United Kingdom.
A F C GreensladeRothamsted Insect Survey, Rothamsted Research, Harpenden, Hertfordshire, United Kingdom.
J R BellRothamsted Insect Survey, Rothamsted Research, Harpenden, Hertfordshire, United Kingdom.
R SigvaldDepartment of Ecology, Swedish University of Agricultural Sciences, Uppsala, Sweden.
D M KenyonSASA, Edinburgh, United Kingdom.
Scottish Agricultural Science Agency · GBRothamsted Research · GBNatural History Museum · GBSwedish University of Agricultural Sciences · SE

Funding

Biotechnology and Biological Sciences Research Council BBS/E/C/000J0200
6 · The paper itself

Abstract

The accurate and rapid identification of insect pests is an important step in the prevention and control of outbreaks in areas that are otherwise pest free. The potato-tomato psyllid Bactericera cockerelli (Šulc, 1909) is the main vector of 'Candidatus Liberibacter solanacearum' on potato and tomato crops in North America and New Zealand; and is considered a threat for introduction in Europe and other pest-free regions. This study describes the design and validation of the first species-specific TaqMan probe-based real-time PCR assay, targeting the ITS2 gene region of B. cockerelli. The assay detected B. cockerelli genomic DNA from adults, immatures, and eggs, with 100% accuracy. This assay also detected DNA from cloned plasmids containing the ITS2 region of B. cockerelli with 100% accuracy. The assay showed 0% false positives when tested on genomic and cloned DNA from 73 other psyllid species collected from across Europe, New Zealand, Mexico and the USA. This included 8 other species in the Bactericera genus and the main vectors of 'Candidatus Liberibacter solanacearum' worldwide. The limit of detection for this assay at optimum conditions was 0.000001ng DNA (~200 copies) of ITS2 DNA which equates to around a 1:10000 dilution of DNA from one single adult specimen. This assay is the first real-time PCR based method for accurate, robust, sensitive and specific identification of B. cockerelli from all life stages. It can be used as a surveillance and monitoring tool to further study this important crop pest and to aid the prevention of outbreaks, or to prevent their spread after establishment in new areas.

Indexed as

Databases, GeneticDNA Barcoding, TaxonomicSolanum lycopersicumAnimalsComputational BiologyHemipteraReal-Time Polymerase Chain ReactionSequence Analysis, DNATime Factors

Identifiers

PMID32214353
PMCPMC7098582
OpenAlexW3013190991

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.