Evidence map›Paper›PMID 32213627›Full record

ArticleScience translational medicine2020

Applying genome-wide CRISPR-Cas9 screens for therapeutic discovery in facioscapulohumeral muscular dystrophy.

Angela Lek, Yuanfan Zhang, Keryn G Woodman, Shushu Huang, Alec M DeSimone, Justin Cohen, Vincent Ho, James Conner, Lillian Mead, Andrew Kodani and 7 more

Open access · greenAbstract read
In one paragraph

Article in Science translational medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed, 1 pooled it
4.4field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 1 synthesis or guideline pooled it, 79 citations in OpenAlex.

  1. Pooled it
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  6. Deciphering Facioscapulohumeral Dystrophy in the clinical trials era: where are we now?Acta myologica : myopathies and cardiomyopathies : official journal of the Mediterranean Society of Myology · 2025
    Review
  7. Muscular Dystrophies.Advances in experimental medicine and biology · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 2 countries.

Angela LekDepartment of Genetics, Yale School of Medicine, New Haven, CT 06510, USA. kunkel@enders.tch.harvard.edu angela.lek@yale.edu.ORCID 0000-0001-5889-2169
Yuanfan ZhangDivision of Genetics and Genomics, Boston Children's Hospital, Boston, MA 02115, USA.ORCID 0000-0002-4325-8533
Keryn G WoodmanDepartment of Genetics, Yale School of Medicine, New Haven, CT 06510, USA.ORCID 0000-0002-4969-3026
Shushu HuangDepartment of Genetics, Yale School of Medicine, New Haven, CT 06510, USA.
Alec M DeSimoneDepartment of Genetics, Yale School of Medicine, New Haven, CT 06510, USA.ORCID 0000-0001-9961-9839
Justin CohenDepartment of Genetics, Yale School of Medicine, New Haven, CT 06510, USA.ORCID 0000-0003-3844-0653
Vincent HoDepartment of Genetics, Yale School of Medicine, New Haven, CT 06510, USA.
James ConnerDivision of Genetics and Genomics, Boston Children's Hospital, Boston, MA 02115, USA.ORCID 0000-0002-8886-1475
Lillian MeadDivision of Genetics and Genomics, Boston Children's Hospital, Boston, MA 02115, USA.ORCID 0000-0001-9084-380X
Andrew KodaniDivision of Genetics and Genomics, Boston Children's Hospital, Boston, MA 02115, USA.
Anna PakulaDivision of Genetics and Genomics, Boston Children's Hospital, Boston, MA 02115, USA.
Neville SanjanaNew York Genome Center, New York, NY 10013, USA.ORCID 0000-0002-1504-0027
Oliver D KingWellstone Muscular Dystrophy Program, Department of Neurology, University of Massachusetts Medical School, Worcester, MA 01655, USA.
Peter L JonesDepartment of Pharmacology, University of Nevada, Reno School of Medicine, Reno, NV 89557, USA.
Kathryn R WagnerCenter for Genetic Muscle Disorders, Kennedy Krieger Institute, Baltimore, MD 21205, USA.
Monkol LekDepartment of Genetics, Yale School of Medicine, New Haven, CT 06510, USA.
Louis M KunkelDivision of Genetics and Genomics, Boston Children's Hospital, Boston, MA 02115, USA. kunkel@enders.tch.harvard.edu angela.lek@yale.edu.ORCID 0000-0001-6126-0242
Boston Children's Hospital · USYale University · USUniversity of Massachusetts Chan Medical School · USKennedy Krieger Institute · USNantong University · CNNew York Genome Center · USUniversity of Nevada, Reno · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Training Core [Parent Title: NOVEL THERAPEUTICS FOR FSHD]P50HD060848 · NICHD · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI EMERSON, CHARLES P. · 2018 to 2023
$8.6M
Mechanisms of DUX4 mediated FSHD pathologyR01AR062587 · NIAMS · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI JONES, PETER L · 2013 to 2024
$5.3M
Mouse Neurodevelopmental Behavior CoreU54HD090255 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI KUNKEL, LOUIS M · 2016 to 2020
$5.2M
Predicting the functional impact of non-coding mutations using patient-specific gene regulatory networksR01CA218668 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI EKTA KHURANA, Neville Sanjana · 2018 to 2026
$4.7M
In situ functional genomics to understand transcriptional regulationDP2HG010099 · NHGRI · NEW YORK GENOME CENTER · PI SANJANA, NEVILLE · 2017 to 2022
$4.4M
Genome engineering tools for functional screening of non-coding elementsR00HG008171 · NHGRI · NEW YORK GENOME CENTER · PI SANJANA, NEVILLE · 2016 to 2018
$733k
NCATS NIH HHS UL1 TR001863NCI NIH HHS R01 CA218668NHGRI NIH HHS DP2 HG010099NHGRI NIH HHS R00 HG008171NIAMS NIH HHS R01 AR062587NICHD NIH HHS P50 HD060848NICHD NIH HHS U54 HD090255
6 · The paper itself

Abstract

The emergence of CRISPR-Cas9 gene-editing technologies and genome-wide CRISPR-Cas9 libraries enables efficient unbiased genetic screening that can accelerate the process of therapeutic discovery for genetic disorders. Here, we demonstrate the utility of a genome-wide CRISPR-Cas9 loss-of-function library to identify therapeutic targets for facioscapulohumeral muscular dystrophy (FSHD), a genetically complex type of muscular dystrophy for which there is currently no treatment. In FSHD, both genetic and epigenetic changes lead to misexpression of

Indexed as

Muscular Dystrophy, FacioscapulohumeralAnimalsClustered Regularly Interspaced Short Palindromic RepeatsCRISPR-Cas SystemsHomeodomain ProteinsHumansZebrafishHomeodomain Proteins

Identifiers

PMID32213627
PMCPMC7304480
OpenAlexW3013045622

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.