Evidence map›Paper›PMID 32213464›Full record

ArticleiScience2020

EDEM3 Modulates Plasma Triglyceride Level through Its Regulation of LRP1 Expression.

Yu-Xin Xu, Gina M Peloso, Taylor H Nagai, Taiji Mizoguchi, Amy Deik, Kevin Bullock, Honghuang Lin, Kiran Musunuru, Qiong Yang, Ramachandran S Vasan and 4 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 6 institutions in 1 country.

Yu-Xin XuCenter for Genomic Medicine, Massachusetts General Hospital, Simches 5.500, 185 Cambridge St., Boston, MA 02114, USA. Electronic address: yuxin.xu2006@gmail.com.
Gina M PelosoDepartment of Biostatistics, Boston University School of Public Health, Boston, MA 02118, USA.
Taylor H NagaiCenter for Genomic Medicine, Massachusetts General Hospital, Simches 5.500, 185 Cambridge St., Boston, MA 02114, USA.
Taiji MizoguchiCenter for Genomic Medicine, Massachusetts General Hospital, Simches 5.500, 185 Cambridge St., Boston, MA 02114, USA.
Amy DeikThe Metabolomics Program, Broad Institute, Cambridge, MA 02142, USA.
Kevin BullockThe Metabolomics Program, Broad Institute, Cambridge, MA 02142, USA.
Honghuang LinSection of Computational Biomedicine, Department of Medicine, Boston University School of Medicine, Boston, MA 02118, USA.
Kiran MusunuruCardiovascular Institute, Department of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Qiong YangDepartment of Biostatistics, Boston University School of Public Health, Boston, MA 02118, USA.
Ramachandran S VasanPreventive Medicine and Epidemiology, Boston University School of Medicine, Boston, MA 02118, USA; Framingham Heart Study of the NHLBI and Boston University School of Medicine, Framingham, MA 01702, USA.
Robert E GersztenDivision of Cardiovascular Medicine, Beth Israel Deaconess Medical Center, Boston, MA 02215, USA.
Clary B ClishThe Metabolomics Program, Broad Institute, Cambridge, MA 02142, USA.
Daniel RaderInstitute for Translational Medicine and Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Sekar KathiresanCenter for Genomic Medicine, Massachusetts General Hospital, Simches 5.500, 185 Cambridge St., Boston, MA 02114, USA. Electronic address: skathiresan1@partners.org.
Massachusetts General Hospital · USBoston University · USBroad Institute · USUniversity of Pennsylvania · USBeth Israel Deaconess Medical Center · USFramingham Heart Study · US

Funding

ROLE OF DIETARY CONSTITUENTS ON GENE EXPRESSION IN INTESTINAL EPITHELIUMP30DK040561 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI STEVEN K. GRINSPOON · 1994 to 2026
$31.6M
Whole genome sequences in individuals to comprehensively characterize the genetic mechanisms of dyslipidemiasR01HL142711 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI Satoshi Koyama, Gina Marie Peloso · 2019 to 2026
$4.7M
Systematic cell-based functional screening for LDL and triglyceride genesR33HL120781 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI COWAN, CHAD ALBERT, KATHIRESAN, SEKAR · 2016 to 2018
$1.6M
Discovering lipoprotein lipase pathway variants that protect against CHDK01HL125751 · NHLBI · MASSACHUSETTS GENERAL HOSPITAL · PI PELOSO, GINA MARIE · 2015 to 2018
$562k
Genetic determinants of triglyceride-rich lipoproteins to disentangle CHD riskR03HL141439 · NHLBI · BOSTON UNIVERSITY MEDICAL CAMPUS · PI PELOSO, GINA MARIE · 2018 to 2019
$181k
NHLBI NIH HHS K01 HL125751NHLBI NIH HHS R01 HL142711NHLBI NIH HHS R03 HL141439NHLBI NIH HHS R33 HL120781NIDDK NIH HHS P30 DK040561
6 · The paper itself

Abstract

Human genetics studies have uncovered genetic variants that can be used to guide biological research and prioritize molecular targets for therapeutic intervention for complex diseases. We have identified a missense variant (P746S) in EDEM3 associated with lower blood triglyceride (TG) levels in >300,000 individuals. Functional analyses in cell and mouse models show that EDEM3 deficiency strongly increased the uptake of very-low-density lipoprotein and thereby reduced the plasma TG level, as a result of up-regulated expression of LRP1 receptor. We demonstrate that EDEM3 deletion up-regulated the pathways for RNA and endoplasmic reticulum protein processing and transport, and consequently increased the cell surface mannose-containing glycoproteins, including LRP1. Metabolomics analyses reveal a cellular TG accumulation under EDEM3 deficiency, a profile consistent with individuals carrying EDEM3 P746S. Our study identifies EDEM3 as a regulator of blood TG, and targeted inhibition of EDEM3 may provide a complementary approach for lowering elevated blood TG concentrations.

Indexed as

DiabetologyGeneticsMetabolomicsSpecialized Functions of Cells

Identifiers

PMID32213464
PMCPMC7093811
OpenAlexW3012326314

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.