Evidence map›Paper›PMID 32211193›Full record

ArticleEvolution, medicine, and public health2020

An African origin for

Chloé Loiseau, Fabrizio Menardo, Abraham Aseffa, Elena Hailu, Balako Gumi, Gobena Ameni, Stefan Berg, Leen Rigouts, Suelee Robbe-Austerman, Jakob Zinsstag and 2 more

Open access · goldAbstract read
In one paragraph

Article in Evolution, medicine, and public health, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 67 citations in OpenAlex.

  1. Insight into the genetic diversity ofMicrobiology spectrum · 2026
    Article
  2. Article
  3. First report of whole genome sequence of a Mycobacterium bovis (3/86Rv) strain isolated from a cow in India.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology] · 2025
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Diversification of gene content in theMicrobiology spectrum · 2024
    Article
  11. Article
  12. InsideFrontiers in microbiology · 2024
    Article
  13. Article
  14. Review
  15. Features ofMicroorganisms · 2023
    Article
  16. Whole genome sequencing of EthiopianFrontiers in microbiology · 2023
    Article
  17. Unraveling the epidemiology ofFrontiers in veterinary science · 2023
    Article
  18. Spoligotype analysis ofZoonoses and public health · 2022
    Article
  19. A critical evaluation ofMicrobial genomics · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 5 countries.

Chloé LoiseauMolecular Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland.
Fabrizio MenardoMolecular Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland.
Abraham AseffaMycobacterial Diseases Directorate, Armauer Hansen Research Centre, Addis Ababa, Ethiopia.
Elena HailuMycobacterial Diseases Directorate, Armauer Hansen Research Centre, Addis Ababa, Ethiopia.
Balako GumiDepartment of Animal Science and Range Management, Bule Hora University, Bule Hora Town, Ethiopia.
Gobena AmeniAklilu Lemma Institute of Pathobiology, Addis Ababa University, Addis Ababa, Ethiopia.
Stefan BergBacteriology Department, Animal & Plant Health Agency (APHA), Weybridge, Surrey, UK.
Leen RigoutsMycobacteriology Unit, Department of Biomedical Sciences, Institute of Tropical Medicine, Antwerp, Belgium.
Suelee Robbe-AustermanDiagnostic Bacteriology and Pathology Laboratory, National Veterinary Services Laboratories, United States Department of Agriculture, Ames, IA, USA.
Jakob ZinsstagMolecular Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland.
Sebastien GagneuxMolecular Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland.
Daniela BritesMolecular Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Basel, Switzerland.ORCID 0000-0002-8090-2287
Swiss Tropical and Public Health Institute · CHArmauer Hansen Research Institute · ETAddis Ababa University · ETAnimal and Plant Health Agency · GBBule Hora University · ETUnited States Department of Agriculture · USUniversity of Antwerp · BE

Funding

Ethiopia-Emory TB Research Training ProgramD43TW009127 · FIC · EMORY UNIVERSITY · PI HENRY M BLUMBERG, Kidist Bobosha · 2013 to 2026
$3.4M
FIC NIH HHS D43 TW009127
6 · The paper itself

Abstract

BACKGROUND AND

objectivesMETHODOLOGY: We compiled a global collection of 3364 whole-genome sequences from

resultsOur results resolved the phylogenetic relationship among the four previously defined clonal complexes of CONCLUSIONS AND IMPLICATIONS: Our results allow a better understanding of the global population structure of LAY SUMMARY: During the last few years, analyses of large globally representative collections of whole-genome sequences (WGS) from the human-adapted Mycobacterium tuberculosis complex (MTBC) lineages have enhanced our understanding of the global population structure, phylogeography and evolutionary history of these pathogens. In contrast, little corresponding data exists for M. bovis, the most important agent of tuberculosis in livestock. Using whole-genome sequences of globally distributed M. bovis isolates, we inferred the genetic relationships among different M. bovis genotypes distributed around the world. The most likely origin of M. bovis is East Africa according to our inferences. While some M. bovis groups remained restricted to East and West Africa, others have subsequently dispersed to different parts of the world driven by cattle movements.

Indexed as

bovine tuberculosismolecular clockMycobacterium bovisphylogeographywhole-genome sequencingzoonosis

Identifiers

PMID32211193
PMCPMC7081938
OpenAlexW3004118323

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.