Evidence map›Paper›PMID 32210988›Full record

ArticleFrontiers in plant science2020

Impact of Autophagy on Gene Expression and Tapetal Programmed Cell Death During Pollen Development in Rice.

Shigeru Hanamata, Jumpei Sawada, Seijiro Ono, Kazunori Ogawa, Togo Fukunaga, Ken-Ichi Nonomura, Seisuke Kimura, Takamitsu Kurusu, Kazuyuki Kuchitsu

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 1 country.

Shigeru HanamataDepartment of Applied Biological Science, Tokyo University of Science, Noda, Japan.
Jumpei SawadaDepartment of Applied Biological Science, Tokyo University of Science, Noda, Japan.
Seijiro OnoPlant Cytogenetics Laboratory, National Institute of Genetics, Mishima, Japan.
Kazunori OgawaDepartment of Applied Biological Science, Tokyo University of Science, Noda, Japan.
Togo FukunagaDepartment of Applied Biological Science, Tokyo University of Science, Noda, Japan.
Ken-Ichi NonomuraPlant Cytogenetics Laboratory, National Institute of Genetics, Mishima, Japan.
Seisuke KimuraFaculty of Life Sciences, Kyoto Sangyo University, Kyoto, Japan.
Takamitsu KurusuImaging Frontier Center, Tokyo University of Science, Noda, Japan.
Kazuyuki KuchitsuDepartment of Applied Biological Science, Tokyo University of Science, Noda, Japan.
Tokyo University of Science · JPNational Institute of Genetics · JPKyoto Sangyo University · JPNiigata University · JPSuwa Red Cross Hospital · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autophagy has recently been shown to be required for tapetal programmed cell death (PCD) and pollen maturation in rice. A transcriptional regulatory network is also known to play a key role in the progression of tapetal PCD. However, the relationship between the gene regulatory network and autophagy in rice anther development is mostly unknown. Here, we comprehensively analyzed the effect of autophagy disruption on gene expression profile during the tapetal PCD in rice anther development using high-throughput RNA sequencing. Expression of thousands of genes, including specific transcription factors and several proteases required for tapetal degradation, fluctuated synchronously at specific stages during tapetal PCD progression in the wild-type anthers, while this fluctuation showed significant delay in the autophagy-deficient mutant

Indexed as

autophagygene regulatory networksprogrammed cell deathquality controlrice tapetum

Identifiers

PMID32210988
PMCPMC7068715
OpenAlexW3009158213

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.