Evidence map›Paper›PMID 32210076›Full record

ArticleCancers2020

Analysis of Dual Class I Histone Deacetylase and Lysine Demethylase Inhibitor Domatinostat (4SC-202) on Growth and Cellular and Genomic Landscape of Atypical Teratoid/Rhabdoid.

Mariah M Hoffman, Jessica S Zylla, Somshuvra Bhattacharya, Kristin Calar, Timothy W Hartman, Ratan D Bhardwaj, W Keith Miskimins, Pilar de la Puente, Etienne Z Gnimpieba, Shanta M Messerli

Open access · goldAbstract read
In one paragraph

Article in Cancers, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Mariah M HoffmanDepartment of Biomedical Engineering, University of South Dakota, Sioux Falls, SD 57107, USA.
Jessica S ZyllaDepartment of Biomedical Engineering, University of South Dakota, Sioux Falls, SD 57107, USA.
Somshuvra BhattacharyaCancer Biology & Immunotherapies, Sanford Research, Sioux Falls, SD 57104, USA.
Kristin CalarCancer Biology & Immunotherapies, Sanford Research, Sioux Falls, SD 57104, USA.
Timothy W HartmanDepartment of Biomedical Engineering, University of South Dakota, Sioux Falls, SD 57107, USA.
Ratan D BhardwajCancer Biology & Immunotherapies, Sanford Research, Sioux Falls, SD 57104, USA.
W Keith MiskiminsCancer Biology & Immunotherapies, Sanford Research, Sioux Falls, SD 57104, USA.
Pilar de la PuenteCancer Biology & Immunotherapies, Sanford Research, Sioux Falls, SD 57104, USA.
Etienne Z GnimpiebaDepartment of Biomedical Engineering, University of South Dakota, Sioux Falls, SD 57107, USA.ORCID 0000-0002-5338-084X
Shanta M MesserliDepartment of Biomedical Engineering, University of South Dakota, Sioux Falls, SD 57107, USA.ORCID 0000-0003-3221-0486
University of South Dakota · USSanford Research · USSouth Dakota State University · US

Funding

Wichozani-A Healthy Lifestyle for Rural American Indian Youth through Cultural and Physical Activities: A Community-Based Participatory Research StudyP20GM103443 · NIGMS · UNIVERSITY OF SOUTH DAKOTA · PI Victor Chester Huber · 2012 to 2026
$58.1M
Yeast 2 HybridP20GM103620 · NIGMS · SANFORD RESEARCH/USD · PI ROUX, KYLE J · 2013 to 2023
$24.2M
The Impact of PD-1 Inhibition on Immune-Response to ChemoradiotherapyP20GM103548 · NIGMS · SANFORD RESEARCH/USD · PI MISKIMINS, W KEITH · 2012 to 2020
$20.8M
National Science Foundation DGE-1633213NIGMS NIH HHS P20GM103443NIH HHS P20GM103548NIH HHS P20GM103620Office of Experimental Program to Stimulate Competitive Research OIA-1849206
6 · The paper itself

Abstract

Central nervous system atypical teratoid/rhabdoid tumors (ATRTs) are rare and aggressive tumors with a very poor prognosis. Current treatments for ATRT include resection of the tumor, followed by systemic chemotherapy and radiation therapy, which have toxic side effects for young children. Gene expression analyses of human ATRTs and normal brain samples indicate that ATRTs have aberrant expression of epigenetic markers including class I histone deacetylases (HDAC's) and lysine demethylase (LSD1). Here, we investigate the effect of a small molecule epigenetic modulator known as Domatinostat (4SC-202), which inhibits both class I HDAC's and Lysine Demethylase (LSD1), on ATRT cell survival and single cell heterogeneity. Our findings suggest that 4SC-202 is both cytotoxic and cytostatic to ATRT in 2D and 3D scaffold cell culture models and may target cancer stem cells. Single-cell RNA sequencing data from ATRT-06 spheroids treated with 4SC-202 have a reduced population of cells overexpressing stem cell-related genes, including

Indexed as

4SC-202ATRTcancer stem cellDomatinostatscaffoldsingle-cell RNA-sequencingsystems biology

Identifiers

PMID32210076
PMCPMC7140080
OpenAlexW3012594994

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.