Evidence map›Paper›PMID 32210020›Full record

ArticleToxins2020

Molecular Mechanism of Aflatoxin-Induced Hepatocellular Carcinoma Derived from a Bioinformatics Analysis.

Peirong Cai, Hao Zheng, Jinjin She, Nannan Feng, Hui Zou, Jianhong Gu, Yan Yuan, Xuezhong Liu, Zongping Liu, Jianchun Bian

Open access · goldAbstract read
In one paragraph

Article in Toxins, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 33 citations in OpenAlex.

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  8. The research progress in the interaction betweenFrontiers in microbiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Peirong CaiCollege of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China.
Hao ZhengCollege of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China.
Jinjin SheCollege of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China.
Nannan FengCollege of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China.
Hui ZouCollege of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China.
Jianhong GuCollege of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China.
Yan YuanCollege of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China.
Xuezhong LiuCollege of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China.
Zongping LiuCollege of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China.
Jianchun BianCollege of Veterinary Medicine, Yangzhou University, Yangzhou 225009, China.ORCID 0000-0001-8023-0751
Yangzhou University · CN

Funding

Priority Academic Program Development of Jiangsu Higher Education Institutions PAPDThe National Key Research and Development Program of China No. 2016YFD0501208
6 · The paper itself

Abstract

Exposure to aflatoxin is considered to be one of the causes of hepatocellular carcinoma (HCC). With the development of bioinformation, we sought to reveal the occurrence and development of aflatoxin-induced HCC through data research. We identified differentially expressed genes (DEGs) of datasets GSE127791 (Aflatoxin-treated pluripotent stem cell derived human hepatocytes vs. controls) and GSE64041 (liver carcinoma with unknown cause vs. non-cancerous tissue) by GEO2R to find the common DEGs. Gene ontology (GO) and KEGG path enrichment analysis were used to annotate the function of DEGs. Hub genes were screened from identified DEGs by protein-protein interaction (PPI) network analysis. The prognostic value of hub genes in cancer databases were evaluated. We obtained 132 common DEGs and 11 hub genes. According to cluster analysis and protein co-expression networks, we screened out the key genes, histidine-rich glycoprotein (HRG) and phosphoenolpyruvate carboxykinase 2 (PCK2). Oncomine database and survival curve analysis showed that the decline in HRG and PCK2 expression in the development of HCC indicated poor prognosis. We speculated that the decreased expression of HRG and PCK2 after aflatoxin exposure to hepatocyte may be related to aflatoxin induced hepatocyte injury and carcinogenesis. In addition, the decreased expression of HRG and PCK2 in the occurrence and development of HCC suggests a poor prognosis of HCC.

Indexed as

AflatoxinsBiomarkers, TumorCarcinoma, HepatocellularComputational BiologyDatasets as TopicGene Expression ProfilingGene Expression Regulation, NeoplasticGene OntologyHumansLiver NeoplasmsMultigene FamilyProtein Interaction MapsSurvival AnalysisAflatoxinsBiomarkers, Tumoraflatoxinbioinformatics analysishepatocellular carcinoma (HCC)HRGPCK2

Identifiers

PMID32210020
PMCPMC7150856
OpenAlexW3014046426

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.