Evidence map›Paper›PMID 32208137›Full record

ArticleeLife2020

A roadmap for gene functional characterisation in crops with large genomes: Lessons from polyploid wheat.

Nikolai M Adamski, Philippa Borrill, Jemima Brinton, Sophie A Harrington, Clémence Marchal, Alison R Bentley, William D Bovill, Luigi Cattivelli, James Cockram, Bruno Contreras-Moreira and 17 more

Abstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 66 papers.

0numbers the graph read from it
0cells of the map it votes in
66citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

66 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Progress and innovations of gene cloning in wheat and its close relatives.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
    Review
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Review
  18. A conditional mutation in a wheat (Triticum aestivum L.) gene regulating root morphology.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  19. Mapping heat tolerance QTLs inFrontiers in plant science · 2024
    Article
  20. Article

6 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors.

Nikolai M Adamski *John Innes Centre, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0003-1329-5138
Philippa Borrill *School of Biosciences, University of Birmingham, Birmingham, United Kingdom.ORCID 0000-0002-7623-8256
Jemima Brinton *John Innes Centre, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0001-7027-0450
Sophie A Harrington *John Innes Centre, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0003-0754-0678
Clémence Marchal *John Innes Centre, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0003-1669-3270
Alison R BentleyJohn Bingham Laboratory, Cambridge, United Kingdom.
William D BovillCommonwealth Scientific and Industrial Research Organisation, Agriculture and Food (CSIRO), Canberra, Australia.
Luigi CattivelliCouncil for Agricultural Research and Economics, Research Centre for Genomics and Bioinformatics, Fiorenzuola d'Arda, Italy.ORCID 0000-0002-6067-4600
James CockramJohn Bingham Laboratory, Cambridge, United Kingdom.
Bruno Contreras-MoreiraEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, United Kingdom.
Brett FordCommonwealth Scientific and Industrial Research Organisation, Agriculture and Food (CSIRO), Canberra, Australia.
Sreya GhoshJohn Innes Centre, Norwich Research Park, Norwich, United Kingdom.
Wendy HarwoodJohn Innes Centre, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0002-4323-9009
Keywan Hassani-PakRothamsted Research, Harpenden, United Kingdom.
Sadiye HaytaJohn Innes Centre, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0003-2920-4720
Lee T HickeyQueensland Alliance for Agriculture and Food Innovation, The University of Queensland, St Lucia, Australia.
Kostya KanyukaRothamsted Research, Harpenden, United Kingdom.ORCID 0000-0001-6324-4123
Julie KingDivision of Plant and Crop Sciences, The University of Nottingham, Sutton Bonington Campus, Loughborough, United Kingdom.
Marco MaccaferrriDepartment of Agricultural and Food Sciences (DISTAL), Alma Mater Studiorum - Università di Bologna (University of Bologna), Bologna, Italy.
Guy NaamatiEuropean Molecular Biology Laboratory, European Bioinformatics Institute, Wellcome Genome Campus, Hinxton, United Kingdom.
Curtis J PozniakCrop Development Centre, University of Saskatchewan, Saskatoon, Canada.
Ricardo H Ramirez-GonzalezJohn Innes Centre, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0001-5745-7085
Carolina SansaloniInternational Maize and Wheat Improvement Center (CIMMYT), El Batán, Mexico.ORCID 0000-0003-2675-4524
Ben TrevaskisCommonwealth Scientific and Industrial Research Organisation, Agriculture and Food (CSIRO), Canberra, Australia.
Luzie U WingenJohn Innes Centre, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0002-4682-4764
Brande Bh WulffJohn Innes Centre, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0003-4044-4346
Cristobal UauyJohn Innes Centre, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0002-9814-1770

Funding

Biotechnology and Biological Sciences Research Council BB/M008908/1Biotechnology and Biological Sciences Research Council BB/M011666/1Biotechnology and Biological Sciences Research Council BB/M014045/1Biotechnology and Biological Sciences Research Council BB/P010741/1Biotechnology and Biological Sciences Research Council BB/P013511/1Biotechnology and Biological Sciences Research Council BB/P016855/1Biotechnology and Biological Sciences Research Council BBS/E/J/000C0628Monsanto-Beachell Borlaug International Scholarship MBBIS 06-400258-12580Royal Society RGS\R1\191163
6 · The paper itself

Abstract

Understanding the function of genes within staple crops will accelerate crop improvement by allowing targeted breeding approaches. Despite their importance, a lack of genomic information and resources has hindered the functional characterisation of genes in major crops. The recent release of high-quality reference sequences for these crops underpins a suite of genetic and genomic resources that support basic research and breeding. For wheat, these include gene model annotations, expression atlases and gene networks that provide information about putative function. Sequenced mutant populations, improved transformation protocols and structured natural populations provide rapid methods to study gene function directly. We highlight a case study exemplifying how to integrate these resources. This review provides a helpful guide for plant scientists, especially those expanding into crop research, to capitalise on the discoveries made in

Indexed as

ArabidopsisCrops, AgriculturalGenome, PlantGenomicsMolecular Sequence AnnotationPlant BreedingPolyploidyTriticumcrop geneticsgenomicsplant biologypolyploidywheat

Identifiers

PMID32208137
PMCPMC7093151

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.