Evidence map›Paper›PMID 32207245›Full record

ArticleCancer medicine2020

Molecular profiling of gastric cancer in a population with high HIV prevalence reveals a shift to MLH1 loss but not the EBV subtype.

Violet Kayamba, Julia Butt, Tim Waterboer, Ellen Besa, Naheed Choudhry, Anglin Hamasuku, Peter Julius, Douglas C Heimburger, Masharip Atadzhanov, Paul Kelly

Open access · goldAbstract read
In one paragraph

Article in Cancer medicine, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
0.3field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 10 citations in OpenAlex.

  1. Pooled it
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  3. Review
  4. Review
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 4 countries.

Violet KayambaTropical Gastroenterology & Nutrition Group, Department of Internal Medicine, Lusaka, Zambia.ORCID 0000-0002-6521-2501
Julia ButtCancer Control and Population Sciences Program, Duke Cancer Institute, Duke University, Durham, NC, USA.
Tim WaterboerInfection and Cancer Epidemiology Group, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Ellen BesaTropical Gastroenterology & Nutrition Group, Department of Internal Medicine, Lusaka, Zambia.
Naheed ChoudhryBlizard Institute, Barts & The London School of Medicine and Dentistry, Queen Mary University of London, London, UK.
Anglin HamasukuUniversity Teaching Hospital, Lusaka, Zambia.
Peter JuliusUniversity of Zambia School of Medicine, Lusaka, Zambia.
Douglas C HeimburgerVanderbilt Institute for Global Health and Department of Medicine, Vanderbilt University Medical Center, Nashville, TN, USA.
Masharip AtadzhanovUniversity of Zambia School of Medicine, Lusaka, Zambia.
Paul KellyTropical Gastroenterology & Nutrition Group, Department of Internal Medicine, Lusaka, Zambia.
University of Zambia · ZMQueen Mary University of London · GBDuke University · USGerman Cancer Research Center · DETropical Gastroenterology & Nutrition group · ZMUniversity Teaching Hospital · ZMVanderbilt Health · US

Funding

UNZA-Vanderbilt Training Partnership for HIV-NCD Research (UVP-2)D43TW009744 · FIC · VANDERBILT UNIVERSITY MEDICAL CENTER · PI HEIMBURGER, DOUGLAS CORBETT, MUTALE, WILBROAD · 2015 to 2025
$3.2M
FIC NIH HHS D43 TW009744
6 · The paper itself

Abstract

The human immunodeficiency virus (HIV) pandemic heavily affects sub-Saharan Africa. It is associated with persistently active Epstein-Barr virus (EBV) infection. To determine if this translates into increased frequency of EBV-associated gastric cancer (EBVaGC), we evaluated molecular profiles of gastric cancer (GC) in Zambia. Patients with GC or premalignant gastric lesions were enrolled in Lusaka, Zambia. We used patients without any of these lesions as a control group. Chromogenic in situ hybridization (CISH) on tumor tissue was used to identify EBVaGC. To identify the microsatellite unstable subtype, immunofluorescence staining for MutL homolog 1 (MLH1) was used. Exposure to EBV and HIV was assessed serologically. We enrolled 369 patients (median age 52 years [IQR 41-65]; 198 (54%) female). Of these, 72 (20%) had GC and 35 (9%) had gastric premalignant lesions (PL). CISH identified EBVaGC in 5/44 (11%) of those with adequate tissue, while MLH1 loss was identified in 29/45 (64%). Both GC and PL were associated with the highest titers of antibodies to Early antigen-diffuse (OR 2.5, 95% CI 1.0-6.1, P = .048 and OR 3.9, 95% CI 1.1-12.9, P = .03, respectively) at high concentrations. Human immunodeficiency virus infection was associated with a range of antibodies to EBV, but not with any cancer subtype. Despite the association of HIV with persistent EBV, the proportion of EBVaGC in Zambia is similar to populations with a low prevalence of HIV infection. The proportion of microsatellite unstable tumors may be higher than other populations.

Indexed as

AdenocarcinomaAdultChronic DiseaseEndoscopy, Digestive SystemEpstein-Barr Virus InfectionsFemaleGastritis, AtrophicHIV InfectionsHumansIn Situ HybridizationMaleMetaplasiaMicrosatellite InstabilityMiddle AgedMutL Protein Homolog 1Stomach NeoplasmsMutL Protein Homolog 1

Identifiers

PMID32207245
PMCPMC7221426
OpenAlexW3012937611

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.