Evidence map›Paper›PMID 32205931›Full record

ArticlePhysiology and molecular biology of plants : an international journal of functional plant biology2020

Identification and validation of superior housekeeping gene(s) for qRT-PCR data normalization in

Muhammad Bilal Sarwar, Zarnab Ahmad, Batcho Agossa Anicet, Moon Sajid, Bushra Rashid, Sameera Hassan, Mukhtar Ahmed, Tayyab Husnain

Abstract read
In one paragraph

Article in Physiology and molecular biology of plants : an international journal of functional plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Muhammad Bilal Sarwar1National Center of Excellence in Molecular Biology (CEMB), University of the Punjab, Lahore, Pakistan.
Zarnab Ahmad1National Center of Excellence in Molecular Biology (CEMB), University of the Punjab, Lahore, Pakistan.
Batcho Agossa Anicet1National Center of Excellence in Molecular Biology (CEMB), University of the Punjab, Lahore, Pakistan.
Moon Sajid1National Center of Excellence in Molecular Biology (CEMB), University of the Punjab, Lahore, Pakistan.
Bushra Rashid1National Center of Excellence in Molecular Biology (CEMB), University of the Punjab, Lahore, Pakistan.ORCID 0000-0002-2076-9920
Sameera Hassan1National Center of Excellence in Molecular Biology (CEMB), University of the Punjab, Lahore, Pakistan.
Mukhtar Ahmed1National Center of Excellence in Molecular Biology (CEMB), University of the Punjab, Lahore, Pakistan.
Tayyab Husnain1National Center of Excellence in Molecular Biology (CEMB), University of the Punjab, Lahore, Pakistan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The adaptive mechanisms in Agave species enable them to survive and exhibit remarkable tolerance to abiotic stresses. Quantitative real-time PCR is a highly reliable approach for validation of targeted differential gene expression. However, stable housekeeping gene(s) is prerequisite for accurate normalization of expression data by qRT-PCR. Till date, no systematic validation study for candidate housekeeping gene identification or evaluation has been carried-out in Agave species. A total of 17 candidate housekeeping genes were identified from the de novo assembled transcriptomic data of

Indexed as

Abiotic stressesAgave sisalanaData normalizationHousekeeping genesQuantitative real-time PCRRelative absolute quantification

Identifiers

PMID32205931
PMCPMC7078421

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.